Mastomys coucha (southern multimammate mouse): 116090835
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Entry
116090835 CDS
T07224
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116090835 (Sema6d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
116090835
NCBI-ProteinID:
XP_031227574
LinkDB
All DBs
Position
Unknown
AA seq
1086 aa
AA seq
DB search
MRFFLLWFCVLFLLVSRLWAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPQTEVLPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLSTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDDTLSFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLLLTEDFFAFHNHSAGGYEQDTEYGNTAHLGDCHESLPTSTTPDYKIFGGPT
SDMEAPSSSVTTVASSPEITSKVIDTWRPKLTSSRKFVVQDDPNTSDFTDTISGIPKGVR
WEVQSGDSNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDMFVRKNRKIHKDAESAQSC
TDSSGSFAKLNGLFDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMAMDHRGQPPE
LAALPTPESTPVLHQKTLQAMKSHSEKAHSHGASRKEHPQFFPSSPPPHSPLSHGHIPSA
IVLPNATHDYNTSFSNSNAHKAEKKLQNIDHPLTKSSSKREHRRSVDSRNTLNDLLKHLN
DPNSNPKAIMGEIHMAHQTLMLDPVGPMSEVPPKVPNREASLYSPPSTLPRNSPTKRVDV
PTTPGVPMTSLERQRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMATPTGA
KVDYIQGTPVSVHLQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRP
LNKYTY
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaggttctttctgctttggttctgcgtgctgttccttctggtctccaggttatgggca
gtcagcttcccagaagatgatgagccccttaacacggtcgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcacagcataggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtctatacagtg
aacttaaatgaaatcccccaaacagaggtgctgccaagcaagaagctgacgtggaggtcc
agacagcaggatcgagaaaactgtgctatgaaaggcaagcataaagatgaatgccacaac
ttcatcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggcaccaatgct
ttcaacccaatgtgcagatactataggttgagtaccttggagtatgatggggaagaaatt
agcggcctggcacgatgcccgtttgatgcccgacaaaccaatgttgctctctttgctgat
gggaaactctattctgccacagtggctgatttcctggccagtgatgctgtcatttacaga
agcatgggcgatggatctgcccttcgcacaataaaatatgattccaaatggatcaaagaa
ccacacttccttcatgccatagaatatggaaactatgtctatttcttctttagagaaatc
gccgtggaacataataacctaggcaaggctgtgtattcccgagtggctcgaatttgtaaa
aacgacatgggtggctcccagcgggtcctggagaaacactggacttccttcctaaaagct
cggcttaactgctcagttcctggagattcctttttctacttcgatgtgctgcagtctata
acagacataatccaaatcaatggcatccccactgtggttggggtcttcaccacacagctc
aacagcattcctggttctgcagtctgtgccttcagcatggatgacattgagaaagtgttc
aaggggcggttcaaagaacagaaaaccccagactctgtttggacagcggttcctgaagat
aaagtaccaaaaccaaggcctggctgctgtgccaaacacggcctcgcggaagcttacaag
acctccattgactttccagatgatacgctgtctttcatcaagtcccatccgctgatggac
tctgctgtcccacccattgctgatgagccctggttcacaaagacacgggtcaggtacagg
ttgacagccatcgaagtggaccgttcagcggggccataccaaaactacacagtcatcttt
gttggctctgaagccggtgtggtgcttaaagttttggcaaagaccagccctttctctttg
aatgacagtgtattactcgaagagattgaagcttacaatccagccaagtgcagcgccgag
agcgaggaggacagaaaggtcgtctcattacagctggacaaggatcatcatgctttatat
gtggccttctctagctgcgtggtccgcatccccctcagccgctgcgagcgctacggatcc
tgtaaaaagtcttgtattgcatcacgggacccatactgtggttggttaagccagggagtt
tgtgagagagtgaccctagggatgctgctgttaactgaagacttctttgctttccataac
cacagcgctggaggatatgagcaggacacggagtacggcaacacggcccacctaggggac
tgccacgaaagtttgcctacttcaactacaccagattacaaaatatttggcggtccaaca
tctgacatggaggcaccctcatcttctgttaccactgtggcaagtagcccagaaattaca
tctaaagtgattgatacctggagacctaaactgacgagctcccggaaatttgtagttcaa
gatgacccaaacacttctgattttactgatactatatcaggtatcccgaagggcgtgcgg
tgggaagtccagtctggagattccaaccagatggtccatatgaatgtcctcatcacctgt
gtgtttgccgcctttgttttgggtgcgttcattgcaggagtggctgtatactgttatcgt
gacatgtttgttcggaagaacaggaagatccacaaagacgcagaatctgcccaatcctgc
acagactccagcggaagctttgccaagctcaatggtctctttgacagtcctgtcaaggaa
taccagcagaacattgattctcctaaactctacagcaacctgctgaccagtcggaaggag
ctgccacctaacacggatacaaaatccatggccatggaccatcgaggccagcctccagag
ctggctgcactgcccacaccagaatccacacccgtactccaccagaagaccctgcaggcc
atgaagagccactctgagaaggcccacagccatggagcttcaaggaaagaacacccccag
ttttttccttcgagtcctccaccccattccccattaagtcacgggcatatccccagtgcc
attgttcttccgaacgccactcacgactacaatacatccttctcaaactccaatgcccac
aaagctgaaaagaagctgcagaacattgatcaccctcttacaaagtcatccagtaagagg
gagcaccgacgttctgtggattccagaaataccctcaacgatctcttgaagcatctaaat
gacccaaacagtaaccccaaagccatcatgggagaaatccatatggcccatcaaaccctc
atgctggacccagtgggaccaatgtctgaggtcccacccaaggtccctaaccgggaggca
tctctatactcccctccttcaacactccccagaaatagtccaaccaagagagtagatgtc
cccaccactcctggggtcccaatgacttctctggaaagacaaaggggttatcacaaaaat
tcctcccagaggcactctatatctgctgtgcctaaaaacttaaactcaccaaatggtgtt
ttgttatctagacaaccgagtatgaaccgtggaggatatatggccaccccaacaggggca
aaggtggactatattcaggggacaccggtgagtgttcatctgcagccctccctctccaga
cagagcagctacaccagtaatggcaccctacccaggacgggactaaagaggacaccatcc
ttaaaacctgatgtgccaccaaagccttcctttgtccctcaaaccacatccgtcagacca
ctgaacaaatacacttactag
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