Mastomys coucha (southern multimammate mouse): 116090929
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Entry
116090929 CDS
T07224
Symbol
Vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04140
Autophagy - animal
mcoc04148
Efferocytosis
mcoc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116090929 (Vps16)
04148 Efferocytosis
116090929 (Vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116090929 (Vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116090929 (Vps16)
Membrane trafficking [BR:
mcoc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116090929 (Vps16)
Hops complex
116090929 (Vps16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
116090929
NCBI-ProteinID:
XP_031227759
LinkDB
All DBs
Position
Unknown
AA seq
842 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELKDCLVAAAPYGGPIALLRNCWRKEKSA
SVRPVLEIYSASGMPLASLLWKSGPVVALGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAYRFTLSSNVGDLKLRRMPEVPGLQSAPSCW
TTLCHDRVTHILLAVGPDLYLLDHATCSAVTPAGLAPGVSSFLQMAVSFTYRYLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGNAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPDTFVH
MCQDLRVLNAIRDYHIGIPLTYTQKYRYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPE
VQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRAELAIK
LLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQ
PMALSLYRQFCKHQELDTLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADA
FYKAKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILGGHNKRAEQLAR
DFRIPDKRLWWLKLAALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKHEAKKYAS
RVGPEQKVKALLLVGDVAQAADVAVEHRNETELSLVLSHCTGATDGAIADKIQRARAQAQ
KK
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atggactgttacactgcgaactggaacccactcggggactctgccttttaccggaagtat
gagctgtacagcatggactgggacctgaaggaggaactcaaggattgcctggtggctgcg
gcaccctacgggggtcccattgctctactgaggaactgttggagaaaagagaaatctgcc
agcgtgcggccagtactggagatctactctgcatctggcatgccactggctagcctgctg
tggaagagtgggcctgtggtggccctcggctggtcagctgaggaggagctgctctgtgtg
caagaagatggtgcagtgctagtgtatggccttcatggagacttccggaggcacttcagc
atgggcaatgaagtacttcagaaccgtgtcctggatgcccggatttttcacactgagttt
ggttctggggtggccatccttacaggagcctatcgctttactctaagttccaatgtgggt
gacctcaaacttcgtcggatgccagaggtgccaggtctgcagagtgcaccctcatgttgg
accacactgtgccatgaccgggtaacacacattcttctggctgtaggacctgatctttac
cttctggatcatgctacctgctctgcagtgacacctgctggcctagccccaggagtgagc
agcttcctacagatggctgtatccttcacgtatcgttacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
atccgggctcccccgaaacagatggtctggtgtagccgtcctcgaagcaaggaaagggct
gttgttgtggcctgggagaggcggctgatggtggtaggcaatgcgcctgaaagcatacag
tttgtgctagatgaggactcctacttagtgcctgagcttgatggagtccgcatcttttcc
cgaagcacccatgaatttctgcatgaagtcccagtggccagtgaagagatcttcaaaatt
gcctcaatggcccctggagcactgctgttggaggcccagaaggagtatgagaaagagagc
cagaaagcagatgagtacctgcgggagatccaggagctggggcagctgacccaggctgtg
cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcaaaagagtctgctc
agggcggcttcatttggaaagtgtttccttgacagatttccacctgacaccttcgtgcac
atgtgtcaggaccttcgagtgctcaatgctattagggactaccacattgggatccctctc
acctatacccagaaatacagatacaagcagctcaccatccaggtgctgctagacaggctt
gtgttgcggaggctttatcccctggctatccagatatgcgagtacctgcgccttcctgaa
gtacagggtgtcagcaggatcctagcccactgggcctgctacaaggtgcagcagaaagat
gtctcagatgaagatgtagcacgagctattaatcagaagctgggtgacacgcctggtgtt
tcatactctgacattgctgcgcgggcctatggctgtggccgcgctgaactggccattaag
ctgctggagtatgagccacggtcaggggagcaggtacctcttctcctaaagatgaagagg
agcaaacttgcactgagcaaggccattgagagtggagacactgacctggtgtttacagtg
ttgctgcacctaaagaatgaactcaatagaggagactttttcatgactctccggaaccaa
cccatggccctgagtttgtatcgacagttctgtaagcatcaggaactagacactctgaag
gacctttacaatcaggacgacaatcaccaggaattgggcagcttccacatcagagccagc
tatgctgctgaagagcgtattgaagggcgagtggcggctctgcagacagcagctgatgct
ttctacaaggccaagaatgaatttgcagccaaggccacagaggatcaaatgaggctcctg
cggctacagcgacgcctagaggatgagctagggggcaggttcctcgacctatctctacac
gacacggtcaccactcttatccttggaggccacaacaagcgggcagagcagctggcacgt
gactttcgcatccctgacaagaggctctggtggctaaagctggctgccctggccgatttg
gaagattgggaggagctggagaagttttccaaaagcaagaaatcaccaattggctacctg
ccctttgtagagatctgcatgaaacagcataacaaacatgaggccaagaaatacgcttcc
cgtgtgggccctgaacaaaaggtcaaggctttgcttcttgtcggggatgtggctcaggct
gcagatgtggctgttgagcaccggaatgaaacggaactgagccttgttttgtcccactgc
actggagctacagatggggccatagctgacaagattcagcgggccagagcacaagcccag
aagaagtga
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integrated database retrieval system
