Mastomys coucha (southern multimammate mouse): 116090951
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Entry
116090951 CDS
T07224
Symbol
Siglec1
Name
(RefSeq) sialoadhesin isoform X1
KO
K06548
sialoadhesin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116090951 (Siglec1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116090951 (Siglec1)
04090 CD molecules [BR:
mcoc04090
]
116090951 (Siglec1)
04091 Lectins [BR:
mcoc04091
]
116090951 (Siglec1)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
SIGLEC family
116090951 (Siglec1)
CD molecules [BR:
mcoc04090
]
Proteins
116090951 (Siglec1)
Lectins [BR:
mcoc04091
]
I-type lectins (Siglecs)
116090951 (Siglec1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
C2-set_2
Ig_5
Ig_VEGFR-1-like_5th
C1-set
Izumo-Ig
Ig_CD22
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
116090951
NCBI-ProteinID:
XP_031227793
LinkDB
All DBs
Position
Unknown
AA seq
1713 aa
AA seq
DB search
MHLGTGMCILFSLLLLASVFSLGQTTWGVSSPKDVQGLTGSCLLIPCIFSFPADVPVPNG
ITAIWYYDYSGNRPVVTHSGDPKLVDERFRGRAELMGNMDHKVCNLLLKDLKPEDSGTYN
FRFEISDANRWSDVKGTTVTVTKEPSPPTITIPEELREGVEVNFNCSTPYLCLQERQVNL
KWQGQDPKHSVTSNSQSLDPTGVYHQTTLRMALSWQDHGRTLSCQFSLGAHSSQKEVHLQ
VQHAPKGVEILLSSSGRNILPGDLVTLTCQVNSSYPAVSSVQWARDGVDLGAKGHVLQLS
SATWNDSGVYTCQAMNNVGSLVSPPLSLHVFMAEVKMNPAGPILENETVTLLCSMPKEAP
QELHYNWYKNHILLEDAHAPTLRLPAVTRADTGFYFCEVQNTQGSERSSPVSVVVRYPPL
TPDLTTFLETKTGLVGIFHCSVVSEPLATVVLSHGGLTLASSSGENGFNPRFSISSAPNS
LRLEIRDLQPADSGEYTCSATNSLGNAKSSLDFYANVARLLISPAAEVVEGQAVTLSCRS
GLSPAPDTRFFWYLNGALLLEGSSSSLLLPAASSTDAGSYYCRTQAGPNTSGPSLPTVLT
VFYPPRKPTFTARLDLDTSGVGDGRHGVLLCHVDSDPPAQLRLLHKGHVVATSLPSRCGS
CSQRMKVSRASNSLRVEIQKPVLEDEGMYLCEASNTLGNSSASASFNAQATVLAITPSNT
LREGTEANLTCNVSQEVAVSPANFSWFRNGMLWTQGPLETVRLQPVARTDAAVYACRLLT
EDGTQLSAPVVLSVLYAPDSPKLSALLDVGQGHMAVFICTVDSYPLAHLSLFRGDHLLAT
TLELQRPSHGRIQAKATANSLQLEVRELGLEDSGNYHCKATNVLGSANSSLFFQVRGAWV
QVLPSPELQEGQAVVLSCQVPTGVPEGTSYRWYQDGRPLQESTSSTLRIAAISLRQAGAY
HCQAQAPDTATASLAAPVSLHVSYTPRHVTLSALLSTGPGRFGNLVCSVQSDPPAQLQLF
HQNSLVASTLQGPEELASSNPRLHVTVSPNELRLEIHFTELEDDGTYTCKATNTLGQASA
TAVFDAQAVRVAVWPNATVQEGQLVNLTCLVWSTHQDSLSYTWYKGGQQLLGARSISLPS
VTVLDATSYRCGVGLPGHAPHLSRPVTLDVLYAPRSLRLTYLLETQGRQLALVLCTVDSR
PPAQLTLSHGGQLLASSTETSVPNTLRLELQDPRPSNEGLYSCSAHSALGKANTSLELWL
EGVRVKMTPSGTVPEGEPVTVTCEDPAALSPALYAWFHNGHWLQEGPASSLQFLVTTRAH
AGAYFCQVHDTQGTRSSRPASLQILYAPRDAVLSSFRDSRTRLMVVIQCTVDSEPPAELV
LSHNGKVLAASRELQSSVAGIGHIQVSRNALRLQVQDMTVGDDNTYVCTARNMLGSISTT
QRLLTETDIHVAAEPGLDVPEGTALNLSCHLPGGSEPTGNSSFTWFWNRHRLHSAPVPTL
SFTPVVRAQAGLYHCMAELPTGATTSAPVMLRVLYPPKTPTLTVFVEPQDGHQGILDCRV
DSEPLASLTLHRGSQLVASNQLHSAPTQPHIRVTAPPNALRVDIEELGPSNQGEYVCTAS
NPLGSASASTYFGTRALHQLQLFQRLLWVLGFLTGFLCLLLGLVACHAWRKKSSSKLNVN
KNSEEMATQKDTIQLLGLDAATNGTSSRVTSLS
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgggaactgggatgtgcatcctgttctccctgctcctgctggcctctgtcttc
tcactaggccagaccacatggggtgtctccagtcccaaggatgtgcagggcttgacggga
tcttgcctgcttattccctgcatcttcagcttccctgccgatgtaccagtgcccaatggc
atcacagccatctggtactatgactactcgggcaatcggccagtggtaacccactcaggg
gaccccaagctggtagatgagcgcttcaggggccgagctgaactgatggggaacatggat
cataaggtgtgcaacctgttgctcaaagatctgaagcctgaagactctggcacctacaac
ttccgctttgagatcagtgatgccaaccgctggtcagatgtcaaaggcaccacagtcact
gtgacaaaggaacctagccccccaactattaccatcccggaggagctgcgtgaaggcgtg
gaggtgaacttcaactgttccacaccctacctgtgcctgcaggagaggcaggtcaacctg
aagtggcaaggccaggaccccaagcactctgtcacctccaacagccagagcctcgatccc
actggcgtctatcaccagacgaccctacgtatggccctatcctggcaggaccacggtcgg
accctgagctgccagttctcattgggcgcgcacagtagtcagaaagaggttcacctgcaa
gtgcagcatgcccccaaaggtgtggagatcctcctcagctcctccggaaggaacatcctt
ccaggggacctagtcacgctcacctgccaagtgaacagcagctatcctgccgtcagttct
gtgcagtgggccagggacggagtggacctcggagccaagggacatgtgcttcagctatcc
tcagcaacctggaatgattctggggtctacacctgtcaagcaatgaataatgtgggctct
ctggtgtcacccccgctcagcctccatgtttttatggctgaagtcaaaatgaacccagca
gggcccatcttggaaaatgagacagtgacactgctctgtagcatgcccaaggaggcaccc
caggaactccactacaactggtacaagaaccacattcttctggaggatgcccatgcccca
accttgcgcctgcctgcagtcaccagggctgatactggcttctacttctgtgaggtgcag
aacacccagggcagtgagcgctccagcccagtgagtgtggtggtcagatatccacccctc
actccagacctgactacgttcttggagacaaagactggacttgtaggcatcttccactgc
tctgtggtcagtgagcccctggctacggtggtgctgtcacacggagggctcacgttggcc
tccagctctggagaaaatggcttcaacccccgattcagcatttcctctgcccccaactcc
ctgcgcctagaaatccgagacttgcagccagcagacagtggggagtatacttgctcagcc
accaactcccttggaaatgcaaagtccagcctagacttctatgctaatgtggcccgactc
ctcatcagccctgcagcagaggttgtggaagggcaggcggtgaccctgagctgcaggagt
ggcctgagcccagcacctgacactcgcttcttctggtacctgaacggagctctactccta
gagggatccagcagcagcctcctgcttcctgcggcttccagcactgatgccggctcatac
tactgtagaacgcaggctggccccaacaccagtggcccctccctgcctacggtcctcact
gtgttctatcccccaagaaagcccacattcactgccaggctggatttggatacctctgga
gtcggggacggaaggcatggtgtcctcttgtgccatgtagacagtgatcccccagcccag
ctacggcttctccacaaaggccatgtggtggccacttctctgccatcaaggtgtgggagc
tgctcccaacgcatgaaagtcagcagagcctccaactcactacgcgtggagatccagaag
ccagtattagaggatgagggcatgtacctgtgtgaagctagcaacacgctgggcaactcc
tctgcctcagcctctttcaatgctcaggctactgtcctggccatcacaccatcaaataca
ttgcgtgaaggcacagaggccaacctaacttgcaacgtgagccaggaggttgctgtcagc
cctgccaacttctcttggttccggaacggaatgctgtggacccagggaccactggagact
gtgaggctgcagcctgtggccagaactgatgctgctgtctatgcctgccgcctccttact
gaggatggaactcaactctcggctcctgtggtcctaagtgtgctatatgccccagactct
ccaaagctgtcagccctcctggatgtgggccagggccacatggctgtgttcatctgcact
gtggacagctatcccctagctcacctgtctctattccgtggagaccacctcctggccacc
accttggaactccagcgtccatcccatggcaggatccaggccaaggccacagccaactcc
ctgcagctagaggttcgagaactaggtcttgaggactctggaaactaccactgcaaagcc
acaaatgttcttggatcagccaacagttcactcttcttccaggtcagaggagcctgggtc
caggttttaccgtcccctgagctccaggagggccaggctgtggtcctcagctgccaggtg
cccactggggtccccgaggggacctcatatcgctggtatcaggatggccgccccctccag
gagtcaacctcatctacactccgcattgcagccataagtctgaggcaagctggtgcctac
cattgccaggctcaggctccagacacggctactgccagcctggctgcccctgtcagcctc
cacgtgtcctataccccacgccatgttacactcagtgccctgctgagcacgggccctggg
cgattcggcaacctggtatgcagtgtacaaagtgaccctcccgctcagctgcagctgttt
caccagaatagcctcgtggcctctaccctacaaggcccagaggaattggcaagcagtaat
ccccggctgcatgtgactgtgagccccaatgagttgcgcctggagatccactttacagag
ctggaggatgatgggacctatacatgcaaagccaccaacacactgggccaggcctcggct
acagctgtcttcgatgcccaggctgtacgtgtggctgtgtggcccaatgccactgtgcaa
gaggggcagctggtgaacctgacctgcttggtgtggagcacccaccaggactctctcagc
tacacatggtacaagggtgggcaacaactccttggtgccagatccatctccctgcccagt
gttacagttttggatgctacctcctaccgctgtggtgtggggctccctggccacgcaccc
catctctccagacctgtgaccctggatgtcctctatgctccccgaagcctgcggctgacc
tacctcctagagacccagggcaggcagctggccctggtactgtgtaccgtggatagtcgt
ccacctgcccagctaactctcagccacggtggccagctcctagcctcctcaactgaaacc
tctgtccccaacaccctgcgcctagaacttcaggacccaaggcctagtaacgaggggctc
tatagctgctcggcccacagcgcattgggcaaggccaacacatccctggagctttggctg
gaaggtgtacgtgtgaaaatgactccctctggtactgtgcccgagggagagcctgttaca
gtgacctgcgaggaccctgctgccctctcacccgccctctatgcctggtttcacaatggc
cattggcttcaggagggaccagcttcctcactccagttcctggtgactacacgggctcat
gctggcgcttatttttgccaggtgcacgatactcagggcacacggagctccagacctgcc
agcctgcaaattctctatgcccctcgggatgctgtcctgtcttcctttcgagactcaagg
accagactcatggtcgtgattcagtgcaccgtggacagtgagccaccggctgagctggtc
ctatcccacaatggcaaggtgctagctgccagccgcgagcttcagagctcagtggcaggg
ataggccacatccaggtatcccgaaatgctcttcgactgcaggtacaagatatgactgtg
ggtgatgacaacacgtacgtatgcacagcccggaatatgctgggctccatcagcaccacc
cagaggcttctgacggagaccgatatacacgtggcagctgagccaggcttggatgtacca
gagggcacagctctgaacctaagctgccacctccctggtggctctgagcccacgggcaat
tcttccttcacgtggttctggaatcgccaccggctacattcagctcccgtgcccacactc
tccttcactcctgtggtccgagctcaggctgggttgtaccactgcatggctgagctcccc
actggggctactacctctgctccagtcatgctccgtgtcctctatcctcccaagacaccc
actctcacagtgtttgtggagcctcaggatggccaccagggcatcctcgactgtcgagtg
gacagcgagcccctggccagcctcaccctccaccggggcagtcaactagtagcctccaac
caacttcacagtgctcccacccagccccacatccgagtcactgcccctcccaatgccttg
agagtggacatagaggagctcggacctagcaatcaaggggagtatgtgtgcactgcctcc
aatcctctcggctctgcctcagcctccacttactttgggaccagagctctgcaccagctg
cagctgttccagaggctgctctgggtcctgggttttctgacaggcttcctgtgcctgctg
ctgggtctggtggcctgtcacgcctggagaaagaagagttctagcaagctgaatgtgaac
aagaattcagaagagatggccactcagaaagatactatccagctcctaggtcttgatgca
gccacaaatggaacctcatctcgtgtcacatccctgagctga
DBGET
integrated database retrieval system
