Mastomys coucha (southern multimammate mouse): 116091258
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Entry
116091258 CDS
T07224
Symbol
Cpne1
Name
(RefSeq) copine-1 isoform X1
KO
K24526
RNA-binding protein 12
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116091258 (Cpne1)
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
116091258 (Cpne1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
116091258
NCBI-ProteinID:
XP_031228327
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSSRVNLP
ATVPNFNNPSPSVVTATTSVHESNKNIQTFSTASVGTAPPTMGTSFGSPTFSSTIPSTAS
PMNTVPPPPIPPIPAMPSLPPLPSIPPIPVPPPVPTLPPVPPVPPIPPVPTVPPMTTLPP
MSGMPPLNPPPVAPLPAGMNGSGTPMGLNNNLNPVFLGPLNTVNPIQMNSQSSVKSLPIN
PDDLYVSVHGMPFSAMENDVREFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSMGPSGQAHPPPQTLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
DADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNLSYEQREMVLNPEGDVS
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKTEDDAHK
SEHLHRKKLNGREAFVHIVTLEDMREIEKNPPAQGKKGLKIPVPGNPAVPVIPNAGMPTA
GIPTAGIPSAGIPGAGIPSAGMPGSGMPSAGMPGSGMPGAGIPGPGIPGPGIPGAGIPGA
GIPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPALPGPAIPGPAIPGPAIPGAGIPSA
GGEEHVFLTVGSKEANNGPPFNFPGNFGGPNAFGPPLPPPGLGGAFGDVRPVMPSVGNSG
LPGLGLEVPGFGGAPNNISGPAGFGGIPQNFGNGPGSLNAPPGFGSGPPGLGSVPGHLSG
PPAFGPGPGPGPIHIGGPPGFGASSGKPGPTIIKVQNMPFTVSIDEILDFFYGYQVIPGS
VCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLVLG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccatccccgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttattgagtagtaaaacagaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacttagatattccaccagca
aatgctagtagatcaggaccgccacctagctcagggatgagcagcagggtaaacttgcca
gcaacagtacccaactttaataatccttcgccaagtgtagtaactgctactacttctgtt
catgagagcaacaaaaacatacagacattttccacagccagcgtaggaactgctcctcca
actatggggacttcttttgggagtccaacattcagctcaaccattccgagtacagcttct
ccaatgaacacagtcccaccaccaccaattcctccaatcccagcgatgccatctttgcca
ccgctgccatcaattcccccaataccagttcctcctccggtaccaacattgcctcctgtg
ccacctgttcctcccattcccccagtccctactgtgccacctatgaccacattgcctcct
atgtcaggcatgccacccttgaatccaccacctgtggcacctctacctgctggaatgaat
ggctctggaacacctatgggtctgaacaataatctgaaccctgtgtttttgggtccatta
aatactgttaaccctatacagatgaattctcaaagcagcgtgaagtctcttcccatcaac
cctgacgatctgtacgtgagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc
agagagtttttccatgggctccgagttgatgcagtgcatttgttaaaagatcatgtaggt
cggaataatgggaatggattggttaagtttctctcccctcaagatacatttgaagctttg
aaacggaacagaatgctgatgattcaacgctatgtggaagtcagtcctgccacagagaga
cagtgggtagctgctggaggtcatatcacttttaagcaaagtatggggccttctggacaa
gcccaccctcctccgcagacacttccaaggtcaaaatcgcccagtgggcagaaaaggtca
agatcaagatcaccacatgaggctggtttttgtgtttacttaaaagggctaccatttgaa
gcggaaaacaaacatgtcattgatttttttaagaagttggatattgtggaagatagtatt
tatatagcttatggacccaatgggaaagcaactggtgaaggctttgtagaattcaggaat
gatgctgactataaggctgctctctgtcgtcataaacaatacatgggcaatcgctttatt
caagttcatccaataactaagaaaggtatgctagaaaagatagatatgattcgaaaacga
cttcagaacttgagctacgagcagagggaaatggtgttaaatccagagggggacgtcagt
tctgccaaagtctgtgcccatatcacaaacattccatttagcattaccaagatggatgtt
cttcagttcctagaaggaatcccagtggatgagaatgctgtacatgttcttgttgataac
aatgggcagggtttaggacaagcattggttcagtttaaaactgaagatgatgcacataaa
tctgaacacttacaccgtaaaaagctgaatgggagagaagcttttgttcatatagttacc
ctagaagatatgagagagattgagaaaaatcccccagcccaaggaaaaaagggcctaaag
atacctgttccaggtaatcctgcagtaccagtgatacctaatgcagggatgcccactgct
ggaattcccactgccggaatacccagtgctggaataccaggtgctggaatacccagtgct
gggatgccgggctctgggatgcctagtgctgggatgccaggctctggaatgcccggtgct
ggaatacccggtcctggaatacctggtcctggaataccaggtgccggaatacctggtgcc
ggaatacctggtcctgcaatgcctggtcccgcaatgcctggacccgcaatgcctggtccc
gcaatgcctggtcccgcaatgcctggtcccgcaatgcctggtcccgcattacctggtcca
gcaatacctggtccagcaatacctggtccagcaatacctggtgctggcatccccagtgca
ggaggagaagagcatgtcttcctgactgtaggatcaaaggaggccaataatgggccacca
tttaacttccctggtaattttggtgggcccaatgcctttgggccaccactccctcctcca
ggattagggggtgcctttggtgatgttaggcctgttatgccttcggttggaaatagtggt
ttgcctggcctaggactggaagttccaggttttggaggtgcaccaaataatataagtggt
ccagcaggatttggggggatccctcagaactttggaaatggcccaggtagtttaaatgct
cctcctggttttggaagtggaccccctggtcttggaagtgttcctgggcatttgagtggg
cctccagcctttgggcctgggcctgggcctggcccgatccatattggaggtccccctggc
tttggagctagctctggaaaaccaggacctacaataattaaggtgcagaacatgcctttt
actgtatctattgatgaaattttagatttcttttatggttatcaagtaattccaggttca
gtatgtttaaaatacaatgaaaaaggtatgcctactggtgaagccatggtggcttttgaa
tctcgggatgaagccacagctgctgtcattgacttaaatgataggcctataggttcaaga
aaggtaaaactcgttttagggtag
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