Mastomys coucha (southern multimammate mouse): 116091260
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Entry
116091260 CDS
T07224
Symbol
Rbm39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116091260 (Rbm39)
Spliceosome [BR:
mcoc03041
]
Common components
Common spliceosomal components
General mRNP proteins
116091260 (Rbm39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
IHO1
Motif
Other DBs
NCBI-GeneID:
116091260
NCBI-ProteinID:
XP_031228333
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLNSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgaacagtgctaacggccatgaagaacgtagcaaaaagagaaaaaaaagcaagagc
agaagtcgtagtcatgagagaaaaagaagcaaaagtaaagaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgagagcggaaacgaagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaagacggtcccgaagcaaaagtccattcaggaaagacaagagccctgtgagggaa
cctattgacaatctcactcctgaggaaagggatgcaagaacagttttctgcatgcaactg
gcagcaagaattcgaccaagagatttggaagaatttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcctatgtggaa
tttgttgatgtcagttctgtgcctctagcaattggattaactggccaacgagttttggga
gtgccaatcatagtccaggcttcacaggcagaaaaaaacagagctgctgcaatggcaaac
aatttacaaaagggaagtgctggacctatgaggctctatgtgggctccttacattttaac
ataacagaagatatgcttcgggggatctttgaaccttttggaaggattgaaagtattcaa
cttatgatggatagtgaaactggaagatctaagggatatggatttattacattttctgac
tcagaatgtgccaaaaaggctttggaacagcttaatggatttgagttagctgggagacca
atgaaagttggtcatgttactgaacggactgatgcttctagtgcgagttcatttttggac
agtgatgaactagaaaggactggaattgatttgggaacaactggacgtcttcagttaatg
gcaagacttgcagagggtacaggtttgcagatcccacctgcggcacaacaagctttacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagaccgaagcctcagctttagctgcagctgcgtctgttcaacct
cttgcaacacagtgtttccaactttctaatatgtttaatcctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtcattgaagaatgtaataaacatggaggagtc
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatct
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggtcccaagtagacgatga
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