Mastomys coucha (southern multimammate mouse): 116091284
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Entry
116091284 CDS
T07224
Symbol
Cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03420
Nucleotide excision repair
mcoc04120
Ubiquitin mediated proteolysis
mcoc05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116091284 (Cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
116091284 (Cul4b)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
116091284 (Cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116091284 (Cul4b)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116091284 (Cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcoc04147
]
116091284 (Cul4b)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
116091284 (Cul4b)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
116091284 (Cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
116091284 (Cul4b)
Exosome [BR:
mcoc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116091284 (Cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
116091284
NCBI-ProteinID:
XP_031228404
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All DBs
Position
X
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AA seq
712 aa
AA seq
DB search
MFPTGFSFPNPSAASAVAQEVRSATDGNTSTTPPTSAKKGKLNSSSSSSNSSNEKEDFDS
TSSSSTPPQPRDSASPSTSSFCLGVPVATSSHVPIQKKLRFEDNLEFVGFDTKMAEESSS
SSSSSSPTAATSQQQQQQLKTKSILISSVASVHHANGLAKSSTTVSSFANSKPGSAKKLV
IKNFKDKPKLPENYTDETWQKLKGAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYK
QLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCRQMIMIRSIFLFLDRTYVLQN
SMLPSIWDMGLELFRAHIISDQKVQTKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQ
DLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIID
TCFLKNEKFINAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEFKEGKKVEEQASTTERVFQDRQYQIDAAIVRIMKMR
KTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRNFMERYRENPNQYNYIA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttttctttccccaatccctctgctgcttctgctgttgctcaggag
gtcagatctgccactgatggtaataccagcaccactccgcccacctctgccaagaaggga
aagttaaacagcagcagcagcagcagtaacagtagtaacgagaaagaagactttgattcc
acctcttcctcttccacccctccacaacccagagattcggcatccccttcaacctcgtcc
ttctgcctcggggttccagtggccacttccagccacgtacctatacagaagaagctgcgt
tttgaagacaacctggagtttgtagggtttgatacaaaaatggctgaggaatcgtcctcc
tcatcttcctcatcttctccaactgctgcaacctcacagcagcagcagcagcaacttaaa
actaagagtatcttaatttcttctgtggcttcagtgcaccatgcaaacggcctggctaaa
tcatctaccacggtctctagctttgctaacagcaagcctggttcagctaagaagttagtg
atcaagaactttaaagataagcctaaattaccagaaaactataccgatgagacatggcaa
aaactaaaaggagcagtggaagccattcagaatagtacttcaattaagtacaatttagaa
gaactctaccaggctgtagaaaatctttgttcttacaagatttctgcaaatttgtataag
cagctgaggcagatatgtgaagatcacatcaaagcacagatccatcagttcagagaggat
tcattggatagtgttctttttctaaaaaagattgatagatgctggcaaaatcactgcagg
caaatgataatgatcaggagcatttttttgtttctggatagaacttatgttcttcagaat
tcaatgctaccctccatttgggacatgggattagagttatttagggctcatattataagt
gatcaaaaagtccagacgaagtcactaattgcttctgttgaaaaacaacttctaggtgaa
cacttaacagcaattcttcagaaaggtttaaatagcctccttgatgaaaaccgaattcaa
gatttgtctctcctgtatcagctcttcagtagagttcggggtggagttcaggttctctta
cagcagtggattgagtatatcaaggcttttggaagtaccattgttattaatcctgaaaaa
gataaaacgatggttcaagaattattggactttaaagataaagttgaccatataattgat
acctgctttctgaaaaatgaaaaatttatcaatgccatgaaagaagcatttgaaacattc
attaataaaagaccaaataagccagctgaactgatagctaagcatgtggattcaaaactt
cgtgcaggcaacaaagaagctacagatgaagaacttgagaaaatgttggataaaataatg
attatatttagatttatctatggcaaagatgtttttgaggccttctataagaaagattta
gccaaacgcttattagttggcaagagtgcatcagtagatgctgaaaaatcaatgctgtcc
aaactgaaacatgaatgtggagctgcttttaccagcaagcttgaaggaatgtttaaagac
atggagctttctaaagacatcatgattcagttcaaacagtatatgcagaaccagaatgta
cctggcaacattgaattaacggtcaatatcctgacaatgggttactggccaacatatgtg
cctatggaagtccatttgccaccagagatggtaaaacttcaggaaattttcaagacattt
tacttaggcaaacacagtggcaggaaactccagtggcaatcaaccttgggacactgtgtg
ctaaaagctgaatttaaagagggcaagaaagttgaagaacaagcaagcactacagaaaga
gtatttcaagatagacagtaccaaattgatgctgcgatcgtccgaattatgaagatgaga
aaaacacttagccataatcttcttgtctcagaagtctacaatcagctaaaatttccagtt
aaacctgctgatcttaagaaaagaatagaatccctaattgaccgcaacttcatggaaagg
tatagagaaaacccaaatcagtacaactatattgcatag
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