Mastomys coucha (southern multimammate mouse): 116091414
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Entry
116091414 CDS
T07224
Symbol
Ddx27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116091414 (Ddx27)
03009 Ribosome biogenesis [BR:
mcoc03009
]
116091414 (Ddx27)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116091414 (Ddx27)
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116091414 (Ddx27)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Helicases
116091414 (Ddx27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116091414
NCBI-ProteinID:
XP_031228679
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MLAELGFIGTIGENDEVPLEPESDSGDEEEEGPIVLGRKQKALQKSRSADFNPDFVFTEK
EGMYDGSWALADVMSQLKKKRAATTLDEKIEKVRKRRKAEDKEAKSGKVEEKEGQAGSAL
KGQENLGENEAGSEDDGSETDYSSEDEQILTKADTLKVKEKKKKKGQAAGGFFEDASEYD
KSLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALP
VLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAA
LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHH
RQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVA
ALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQID
ILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKML
KEIVKAAKAPVKARILPQDVILKFRDKIEKLEKDVYAVLQLEAEEKELQQSEAQIDTAQR
LLSKGKETADQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDAKKKGEMT
AEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPIAGTAKKQKQQKKSVFDEELTNT
SKKALKQYRAGPSFEERKQSGLPRHRRGNFKSKSRYKRK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgctggcggagctcggcttcatcgggaccatcggcgagaatgacgaggtgccgcttgag
cccgagtcggactccggagacgaggaggaggagggacccattgtactgggccgcaagcag
aaagccttgcagaagagccgcagtgctgacttcaatcctgactttgttttcactgagaag
gagggcatgtatgatggcagctgggccctggctgatgtcatgagccagctcaagaagaag
agggcagccactaccctagatgagaagattgagaaagtacggaagagaaggaaagcagag
gataaggaagccaagtctgggaaggtggaggagaaggaaggccaggcgggctctgccctg
aaggggcaggagaatctgggcgagaatgaggcaggctccgaggatgacggctctgagact
gactactcctctgaggatgagcagatcctcaccaaagcagacacactcaaagtgaaggag
aagaagaagaagaaaggccaggcagcaggaggattctttgaagatgcatctgagtatgac
aaaagcctctccttccaggacatgaacctctcccggcccctcctgaaggccattacagcc
atgggctttaaacagcccactccaatccagaaggcttgcatccctgtgggtctgctgggg
aaagacatctgtgcctgtgcagctactgggacaggcaaaaccgcagcctttgcactgcct
gtcttggagcgtctgatctacaagccccgccaggctgctgtcactcgtgtgctggtgctg
gtccctaccagagagctgggcatccaagtgcactctgtcaccaagcagctggcccagttt
tgcagcatcactacctgcctggctgtgggtggcctggatgtgaagtctcaggaagccgct
cttcgggcagcaccagacatcctcattgccacacctggccggctcatcgaccacctccat
aactgcccttccttccacctgagcagcattgaagtgctcattttggatgaggctgacagg
atgctggatgagtatttcgaggagcagatgaaggagattatccgaatgtgttcccaccac
cgccagaccatgctcttctcggccaccatgacagatgaggtgaaagatctggcttcggtc
tccttaaagaatcctgtgcggatatttgtgaacagcaatacagatgtagctcccttcctg
cggcaagagttcatacgtatccggcctaacagggaaggagaccgggaagccattgtggca
gctttactgatgagaacctttactgaccacgtgatgctgttcacccagaccaagaagcag
gcccatcgcatgcacatcctcttggggctgctggggctgcaggtgggcgagctccacggc
aacttgtcacagacccagcggctggaggccctccggcgctttaaggatgaacagattgac
atcctggtagccacagatgtggcagcccgtggccttgacattgaaggagtgaaaacagtg
atcaacttcaccatgcccaacactgtcaaacactatgtgcaccgggtggggcgaactgcc
cgtgctggcagggctgggcgctctgtctctctggtgggagaagaagagcggaagatgctg
aaggagatcgtgaaggctgccaaggccccagtgaaggctcggatccttccccaggatgtt
atcctcaagttccgggacaagattgagaaactggagaaagatgtgtatgcagtgctgcag
ctggaggcggaggagaaggagctgcagcagtcggaagcccagatcgacacagcacagcga
ctcttatccaaagggaaagagacagcggaccaggagcctgagaggagctggttccagacc
aaagaggagaggaagaaggagaagattgccaaggctctgcaggagtttgacttggcctta
agaggaaagaagaaaaggaagaagtttatgaaggacgccaagaaaaagggggagatgacg
gcagaggagaggtcccagtttgaaatcctcaaggcacagatgtttgcagagcggctggcc
aagaggaaccgcagaaccaagcgagcacgggcaatgcctgaggaagagcctatagcaggc
actgccaagaagcagaagcagcagaagaagtctgtgtttgatgaagaactcaccaacaca
agcaagaaagccctgaaacagtatcgggctggcccttcctttgaagagaggaaacaatca
ggtctgccccgccacaggagagggaacttcaaatctaaatccaggtacaagagaaagtag
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integrated database retrieval system
