KEGG   Mastomys coucha (southern multimammate mouse): 116091481
Entry
116091481         CDS       T07224                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013  Nucleocytoplasmic transport
mcoc05014  Amyotrophic lateral sclerosis
mcoc05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116091481 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    116091481 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    116091481 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116091481 (Rae1)
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116091481 (Rae1)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116091481 (Rae1)
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    116091481 (Rae1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 116091481
NCBI-ProteinID: XP_031228762
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggatcaacctctggatttgggactggtgggaccagcatgtttgggagc
acagccacagataaccacaacccgatgaaggatattgaagtcacgtcttctcctgatgac
agcatcggttgtctgtctttcagcccaccaaccttaccaggcaacttccttattgcagga
tcctgggctaatgatgttcgctgctgggaagtgcaagacagtgggcaaaccattccaaag
gcccagcagatgcacaccgggccagtgctggatgtctgctggagtgatgatgggagcaaa
gtattcacagcatcatgtgacaagacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcatgacgctcctgtgaagaccatacactggatcaaagccccaaac
tacagctgcgtgatgaccgggagctgggataagacgctgaagttttgggatacccggtcg
tcaaatcctatgatggtcttgcaactccctgaacgctgttactgtgcagatgtgatatac
ccgatggctgtggtggccactgcagagaggggcctgattgtgtatcagttagagaatcag
ccctctgagttcaggcgaatagagtctcccctgaagcaccagcatcggtgtgtggctatc
tttaaagacaaacagaacaagccgactggctttgctctggggagcattgagggaagagtt
gccattcactacatcaaccctccaaacccggccaaagataacttcaccttcaaatgccat
cgatccaacggtaccaacacttccgctcctcaagacatctatgcggtgaacggaattgcc
ttccatcctgtccatggcacccttgccactgtgggctctgatggtaggttcagcttctgg
gacaaagatgccaggaccaaactaaagacgtcagaacagttagaccagcccatagcagcg
tgttgcttcaatcacaacggaaacatatttgcctatgcttccagctacgactggtccaag
ggacatgagttttataatccccaaaagaagaattacattttcttgcgtaatgcagctgaa
gagctaaagccaaggaataagaagtag

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