Mastomys coucha (southern multimammate mouse): 116091849
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Entry
116091849 CDS
T07224
Symbol
Col9a3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc04820
Cytoskeleton in muscle cells
mcoc04974
Protein digestion and absorption
mcoc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116091849 (Col9a3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116091849 (Col9a3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116091849 (Col9a3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116091849 (Col9a3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
116091849 (Col9a3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
116091849 (Col9a3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcoc00535
]
116091849 (Col9a3)
Proteoglycans [BR:
mcoc00535
]
Extracellular matrix (ECM) proteoglycans
Others
116091849 (Col9a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
116091849
NCBI-ProteinID:
XP_031229150
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
MTGAPALALLLLGQLLTATSAQKVGPRGPPGPQGPPGKPGKDGIDGETGPPGLPGLPGPK
GTSGKPGKPGEAGLPGLPGIDGLTGRDGPAGPKGAPGERGSLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGLPGLPGPPGPPGPPGNPGVLPEGATDLQCPAICPPGPPG
PPGMPGFKGPTGYKGEQGEVGKDGEKGNPGPPGPPGIPGTVGLQGPRGLRGLPGPLGPPG
DRGPIGFRGPPGIPGAPGKVGMPGKDGKDGVPGLDGEKGEAGRNGAPGEKGPNGLPGLPG
RAGSKGEKGEPGRTGELGEAGPSGEPGIPGDVGVPGERGEAGHRGSVGALGPQGPPGAPG
IRGFQGQKGSIGDPGLPGPQGLRGDVGDRGPGGATGPKGDQGIAGSDGLPGDKGELGPNG
PVGQKGESGSRGELGPKGIQGPNGTSGVQGVPGPPGPLGLQGVQGVPGITGKPGVPGKEA
SEQRIRELCGGMISEQIAQLAAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPP
GYRGPTGELGDPGPRGGQGDRGDKGATGEGLDGPAGDQGYQGPQGVPGISKDGRDGAHGE
PGLPGDPGLPGAAGAQGTPGICDTSACQGAVLGGGGEKSGPRSS
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgaccggagcgcctgctctagccctgctgctgctggggcagctcctgacggccacctca
gcgcagaaagtgggacctcgaggcccccctggtccccaagggcctcctggaaagcccggc
aaggatggcatcgatggagaaactggccctccaggtctgcctggccttccaggacccaaa
ggaacctcggggaagccggggaagccgggagaggcaggactgccaggactgcctggtata
gatggtctgacagggagggatggacccgcaggacccaaaggtgcccctggagaacgggga
agtctaggacccccagggccaccaggacttggaggcaaaggcctccctggacctcctgga
gaggctggagtgagtggcctcccaggtgggattggtcttcgtggccccccgggaccctct
ggacttccaggcctgcctggccccccaggacctcctggacctcctggaaaccctggagtc
ctccctgaaggtgctactgatctgcagtgtccagccatctgccccccaggccctccaggc
cccccaggaatgccagggttcaaggggcctactggctacaaaggggaacaaggagaagtt
ggcaaagatggtgagaagggtaatcctggcccccctgggcctcctggaatcccaggcact
gtgggactacagggcccacgaggattacgaggacttccagggccacttgggccccctggg
gaccggggtcccattgggtttcggggcccccctgggatcccaggagcacctgggaaagtg
ggcatgccaggcaaggatggcaaggatggtgtgccaggacttgatggtgagaagggggag
gctggtcgcaatggtgccccaggagagaaaggccccaatgggctgccggggctccctgga
cgagcagggtccaaaggcgagaagggagaaccgggtagaactggggagctgggtgaggct
ggcccctctggagagccaggtatccctggagatgttggtgttccaggggagcgtggtgag
gctggtcacagaggctcagtgggggctcttggcccacaaggtcctcctggggctcctggt
atccgtggcttccagggccaaaaaggcagcataggagaccctggccttccaggcccccaa
ggcctacggggagatgtgggtgaccggggtccaggaggtgccacaggccctaagggcgac
cagggcattgcaggttctgatggtctcccaggggacaaaggagagctgggtcctaatggc
cccgttggacaaaaaggagagtccggcagccgaggggaactgggccccaaaggcatccag
ggccccaatggcaccagtggagtccagggtgtacctggtcccccaggtccactgggcctc
caaggcgtgcaaggtgtcccaggcatcacagggaagcctggagttccgggcaaggaagcg
agcgaacagcgcatcagggagctatgtggggggatgatcagtgagcaaattgcgcagttg
gctgcacacctgaggaagcccctagcaccaggctccatcggcagacctggtccagctggc
cccccaggccctccaggccctccaggctccattggccaccctggcgctcggggtccccct
ggataccgtggtcccactggggaactaggagatcctggaccaagagggggccagggtgac
agaggagacaagggagcaacaggtgaagggctggacgggcctgctggggaccagggatac
caagggcctcaaggtgtacctggtatcagcaaagatggtcgagatggtgctcatggggag
cctggccttcccggtgatcctggccttcctggagctgctggtgctcagggaaccccaggg
atttgcgacacctcagcctgccaaggagctgtgttaggaggaggtggggaaaagtcgggt
cctcggagctcataa
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