Mastomys coucha (southern multimammate mouse): 116092256
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Entry
116092256 CDS
T07224
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04068
FoxO signaling pathway
mcoc05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
116092256 (Rag1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
116092256 (Rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116092256 (Rag1)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116092256 (Rag1)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116092256 (Rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
116092256
NCBI-ProteinID:
XP_031229450
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MAVALPPTLRLSSAPDEIQHPQIKFSEWKFKLFRVRSFEKAPEEVQKEKDSSEGKPYLEQ
SPVVPEKPSGQNSVLSQRALKLHPKFSKKFHVDGKSSDKATHQARLRYFCRICGNRFKSD
GHNRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARVFRIDVKADVDSIHPTEFCHNCWS
IMHRKFSSAHSQVYFPRNVTVEWHPHTPSCDICFTAHHGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVLKKISNCSKIHLSTDLLAVDFPAHFVKSISCQICEHILADP
VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPAQEC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEDDILEGLRSQDLDDYLNGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTIMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELMLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHTENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNVLKSSGFTMNSKE
TLGDPLGIEDSLESQDSMEF
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgccttgccacccaccctgagactcagttctgcacccgatgaaattcaacac
ccacagatcaaattttccgagtggaaatttaagctatttagggtgagatcctttgaaaag
gcacctgaagaagtacaaaaggagaaggattcctcagaggggaaaccttatctagagcag
tctccagtagttccagagaagcctagtggtcagaactcagttctgtcccaacgagcgttg
aaactccatcctaaattttcaaaaaaattccatgttgatgggaagtcaagcgacaaagca
actcaccaagccaggcttagatacttctgccgcatctgtgggaatcgtttcaagagtgat
gggcacaaccggagatacccagtccacgggcccgtggatgccaaaacccaaagccttttc
cgaaagaaggaaaaaagagtcacttcctggccagacctcattgccagggttttccggatc
gatgtgaaagcagatgttgactccatccaccccaccgaattctgtcataactgttggagc
attatgcacagaaagttcagcagtgcccacagtcaggtctacttcccaaggaatgtgact
gtggaatggcaccctcacacaccgtcctgtgacatctgcttcactgcccatcatggactg
aagaggaagagacatcagcccaacgtgcagctcagcaagaaactaaaaactgtgctcaac
catgcaagacgggaccgtcgcaagagaacccaggctagggtcagcagcaaggaagtcctg
aagaagatctccaactgcagtaagattcatctcagtaccgacctccttgcagtggacttc
ccagcacactttgtgaaatccatctcctgccagatatgtgaacacattctggctgatccc
gtggagaccagctgtaagcacctattctgtaggatctgcattctcagatgcctcaaagtc
atgggcagctattgtccatcttgccgatatccgtgcttccctactgacctggagagtccg
gtgaagtcctttctgagcattttgaattctctgatggtgaagtgtcctgcacaagagtgc
aatgaggaagtgagtctggaaaaatataaccaccatgtctcaagccacaaagaatctaaa
gagacgttggtgcatattaataaagggggccggcctcgccagcatctcctgtcactgacg
agaagggcgcagaaacatcggctgagagagctcaaaattcaagtcaaagaatttgctgac
aaagaagaaggtggagatgtgaagtctgtgtgcttgacgttgttcctgctggcactgagg
gcgaggaatgagcacaggcaagctgatgagctagaggccatcatgcaaggccggggctca
gggcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagtcaa
tatcataagatgtacaggactgtgaaagctatcactgggaggcagatttttcaacctttg
cacgctcttcggaacgccgagaaagtccttctgccaggctaccacccctttgagtggcag
ccccctctgaagaacgtgtcctccagaactgatgttggaattattgatggactgtctgga
cttgcctcctcggtcgatgagtacccagtggataccattgcaaagaggttccgctatgac
tctgctttggtgtctgcattgatggacatggaagacgacatcttggaaggcctgagatcc
caagatcttgatgactacctgaatggtcccttcacagtggtggtaaaggagtcttgtgat
ggaatgggggatgtgagtgagaagcatgggagtgggcccgcagttccggaaaaggcggtt
cgtttctctttcacaatcatgagaattacgatagagcacggctctcagaatgtgaaggtg
tttgaggaacccaagcccaattccgaactgtgttgcaagccattgtgtcttatgctggca
gatgagtctgaccacgagacccttactgctattctaagccccctcatcgctgagagggag
gccatgaagagcagtgaattaatgctggagatgggaggcattcccaggactttcaagttc
atcttcaggggcactggctatgatgaaaaacttgtccgggaagtagaaggcttggaagcc
tctggctcggtctacatctgtacactttgtgatgccacccgtctggaagcctctcaaaat
cttgtcttccactccataaccagaagccacaccgagaacctgcagcgctatgaggtctgg
cggtccaatccctatcacgagtcagtggaagaactccgggaccgtgtgaaaggggtctct
gccaaacctttcatcgagacagtcccttccatagatgcacttcactgtgacattggcaac
gcagctgaattctataagattttccagctggagataggggaagtgtataaaaatcccaac
gcctctaaagaggagaggaagagatggcaggccaccctggacaaacatctccggaagagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtagacgcagtttgcgagttaattccttctgaggagaggcatgaggctctcagg
gagctgatggatctttacctgaagatgaaacccgtgtggcgctcatcatgtcctgctaaa
gagtgtccggagtccctctgtcagtacagtttcaactcccagcgttttgctgagctcctt
tccaccaagttcaaatatagatacgagggtaaaatcaccaattactttcacaaaacctta
gcacatgtccctgaaattattgaaagggatggctctattggggcgtgggcaagcgaggga
aatgaatctggtaacaaactgtttagacgcttccggaaaatgaatgcccggcagtccaag
tgctatgagatggaagatgtcctgaaacatcactggctgtatacttcaaagtaccttcag
aagtttatgaatgctcataatgtgttaaaaagctctgggtttaccatgaactcaaaggag
accttaggggatcctttgggtattgaggactctctggaaagccaagattcaatggagttt
taa
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integrated database retrieval system