KEGG   Mastomys coucha (southern multimammate mouse): 116092256
Entry
116092256         CDS       T07224                                 
Symbol
Rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
  KO
K10628  V(D)J recombination-activating protein 1 [EC:2.3.2.27]
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04068  FoxO signaling pathway
mcoc05340  Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    116092256 (Rag1)
 09160 Human Diseases
  09163 Immune disease
   05340 Primary immunodeficiency
    116092256 (Rag1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcoc04121]
    116092256 (Rag1)
Enzymes [BR:mcoc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     116092256 (Rag1)
Ubiquitin system [BR:mcoc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    116092256 (Rag1)
SSDB
Motif
Pfam: RAG1 RAG1_imp_bd zf-RAG1 zf-C3HC4 zf-C3HC4_2 zf-RING_6 zf-RING_2 zf-RING_10
Other DBs
NCBI-GeneID: 116092256
NCBI-ProteinID: XP_031229450
LinkDB
Position
Unknown
AA seq 1040 aa
MAVALPPTLRLSSAPDEIQHPQIKFSEWKFKLFRVRSFEKAPEEVQKEKDSSEGKPYLEQ
SPVVPEKPSGQNSVLSQRALKLHPKFSKKFHVDGKSSDKATHQARLRYFCRICGNRFKSD
GHNRRYPVHGPVDAKTQSLFRKKEKRVTSWPDLIARVFRIDVKADVDSIHPTEFCHNCWS
IMHRKFSSAHSQVYFPRNVTVEWHPHTPSCDICFTAHHGLKRKRHQPNVQLSKKLKTVLN
HARRDRRKRTQARVSSKEVLKKISNCSKIHLSTDLLAVDFPAHFVKSISCQICEHILADP
VETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLESPVKSFLSILNSLMVKCPAQEC
NEEVSLEKYNHHVSSHKESKETLVHINKGGRPRQHLLSLTRRAQKHRLRELKIQVKEFAD
KEEGGDVKSVCLTLFLLALRARNEHRQADELEAIMQGRGSGLQPAVCLAIRVNTFLSCSQ
YHKMYRTVKAITGRQIFQPLHALRNAEKVLLPGYHPFEWQPPLKNVSSRTDVGIIDGLSG
LASSVDEYPVDTIAKRFRYDSALVSALMDMEDDILEGLRSQDLDDYLNGPFTVVVKESCD
GMGDVSEKHGSGPAVPEKAVRFSFTIMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLA
DESDHETLTAILSPLIAEREAMKSSELMLEMGGIPRTFKFIFRGTGYDEKLVREVEGLEA
SGSVYICTLCDATRLEASQNLVFHSITRSHTENLQRYEVWRSNPYHESVEELRDRVKGVS
AKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYKNPNASKEERKRWQATLDKHLRKR
MNLKPIMRMNGNFARKLMTQETVDAVCELIPSEERHEALRELMDLYLKMKPVWRSSCPAK
ECPESLCQYSFNSQRFAELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEG
NESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNVLKSSGFTMNSKE
TLGDPLGIEDSLESQDSMEF
NT seq 3123 nt   +upstreamnt  +downstreamnt
atggctgtcgccttgccacccaccctgagactcagttctgcacccgatgaaattcaacac
ccacagatcaaattttccgagtggaaatttaagctatttagggtgagatcctttgaaaag
gcacctgaagaagtacaaaaggagaaggattcctcagaggggaaaccttatctagagcag
tctccagtagttccagagaagcctagtggtcagaactcagttctgtcccaacgagcgttg
aaactccatcctaaattttcaaaaaaattccatgttgatgggaagtcaagcgacaaagca
actcaccaagccaggcttagatacttctgccgcatctgtgggaatcgtttcaagagtgat
gggcacaaccggagatacccagtccacgggcccgtggatgccaaaacccaaagccttttc
cgaaagaaggaaaaaagagtcacttcctggccagacctcattgccagggttttccggatc
gatgtgaaagcagatgttgactccatccaccccaccgaattctgtcataactgttggagc
attatgcacagaaagttcagcagtgcccacagtcaggtctacttcccaaggaatgtgact
gtggaatggcaccctcacacaccgtcctgtgacatctgcttcactgcccatcatggactg
aagaggaagagacatcagcccaacgtgcagctcagcaagaaactaaaaactgtgctcaac
catgcaagacgggaccgtcgcaagagaacccaggctagggtcagcagcaaggaagtcctg
aagaagatctccaactgcagtaagattcatctcagtaccgacctccttgcagtggacttc
ccagcacactttgtgaaatccatctcctgccagatatgtgaacacattctggctgatccc
gtggagaccagctgtaagcacctattctgtaggatctgcattctcagatgcctcaaagtc
atgggcagctattgtccatcttgccgatatccgtgcttccctactgacctggagagtccg
gtgaagtcctttctgagcattttgaattctctgatggtgaagtgtcctgcacaagagtgc
aatgaggaagtgagtctggaaaaatataaccaccatgtctcaagccacaaagaatctaaa
gagacgttggtgcatattaataaagggggccggcctcgccagcatctcctgtcactgacg
agaagggcgcagaaacatcggctgagagagctcaaaattcaagtcaaagaatttgctgac
aaagaagaaggtggagatgtgaagtctgtgtgcttgacgttgttcctgctggcactgagg
gcgaggaatgagcacaggcaagctgatgagctagaggccatcatgcaaggccggggctca
gggcttcaaccagctgtttgcttggccatccgtgtcaataccttcctcagctgtagtcaa
tatcataagatgtacaggactgtgaaagctatcactgggaggcagatttttcaacctttg
cacgctcttcggaacgccgagaaagtccttctgccaggctaccacccctttgagtggcag
ccccctctgaagaacgtgtcctccagaactgatgttggaattattgatggactgtctgga
cttgcctcctcggtcgatgagtacccagtggataccattgcaaagaggttccgctatgac
tctgctttggtgtctgcattgatggacatggaagacgacatcttggaaggcctgagatcc
caagatcttgatgactacctgaatggtcccttcacagtggtggtaaaggagtcttgtgat
ggaatgggggatgtgagtgagaagcatgggagtgggcccgcagttccggaaaaggcggtt
cgtttctctttcacaatcatgagaattacgatagagcacggctctcagaatgtgaaggtg
tttgaggaacccaagcccaattccgaactgtgttgcaagccattgtgtcttatgctggca
gatgagtctgaccacgagacccttactgctattctaagccccctcatcgctgagagggag
gccatgaagagcagtgaattaatgctggagatgggaggcattcccaggactttcaagttc
atcttcaggggcactggctatgatgaaaaacttgtccgggaagtagaaggcttggaagcc
tctggctcggtctacatctgtacactttgtgatgccacccgtctggaagcctctcaaaat
cttgtcttccactccataaccagaagccacaccgagaacctgcagcgctatgaggtctgg
cggtccaatccctatcacgagtcagtggaagaactccgggaccgtgtgaaaggggtctct
gccaaacctttcatcgagacagtcccttccatagatgcacttcactgtgacattggcaac
gcagctgaattctataagattttccagctggagataggggaagtgtataaaaatcccaac
gcctctaaagaggagaggaagagatggcaggccaccctggacaaacatctccggaagagg
atgaacttaaaaccaatcatgaggatgaatggcaactttgcccggaagcttatgacccaa
gagactgtagacgcagtttgcgagttaattccttctgaggagaggcatgaggctctcagg
gagctgatggatctttacctgaagatgaaacccgtgtggcgctcatcatgtcctgctaaa
gagtgtccggagtccctctgtcagtacagtttcaactcccagcgttttgctgagctcctt
tccaccaagttcaaatatagatacgagggtaaaatcaccaattactttcacaaaacctta
gcacatgtccctgaaattattgaaagggatggctctattggggcgtgggcaagcgaggga
aatgaatctggtaacaaactgtttagacgcttccggaaaatgaatgcccggcagtccaag
tgctatgagatggaagatgtcctgaaacatcactggctgtatacttcaaagtaccttcag
aagtttatgaatgctcataatgtgttaaaaagctctgggtttaccatgaactcaaaggag
accttaggggatcctttgggtattgaggactctctggaaagccaagattcaatggagttt
taa

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