Mastomys coucha (southern multimammate mouse): 116092571
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Entry
116092571 CDS
T07224
Symbol
Ctcfl
Name
(RefSeq) transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116092571 (Ctcfl)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116092571 (Ctcfl)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116092571 (Ctcfl)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116092571 (Ctcfl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-H2C2_5
zf-C2H2_16
zf-C2H2_15
zf-C2H2_ZNF462_1st
zf-C2H2_jaz
zf-C2H2_REST
zf-C2H2_ZN142
zf-C2HE
zf-C2H2_7
zf-C2H2_7th_ZNF462
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
116092571
NCBI-ProteinID:
XP_031229640
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MAAAEVPAPSGHFTQIKEQKLKPGDLEEEKEEDGAQRVETPEGAAQESEADNSCLLLDAS
PQELPSRTESDRRILTLQTVHLASQDVHLQGLGWLSLPHSEERPGTVPQTEGILQLPSVL
WLDPEPELSLQHCVTVSIPEELYPPEELELMHFHLLQENVLVTEENQELPPNLDESTAPK
KPKEDEKEDQLLPQGGTDKKEERFLFVEMEPNEGKDEIVLSISHLSLEEKQDPPAPPVPK
QTSVPRAKATKPEPGRLTKGKPQTFQCETCPFTSSKLSTFNRHIKIHSDERPHLCHLCLK
AFRTVTLLRNHVNTHTGTRPYKCGDCDMAFVTSGELVRHRRYKHTHEKPFKCSQCKYASV
EASKLKRHMRSHTGERPFQCCQCAYASKDTYKLKRHMRTHSGEKPYECPTCHVRFTQSGT
MKIHMAQKHGENVPKHKCPHCATIIARKSDLRVHLRNLHGHSSEEIKCRYCPAGFHERYA
LIQHQRTHKNEKKFKCKQCDYACKQERCLTAHMRTHTGEKPFSCLPCNKHFRRKQLLTEH
LRKDHDPSFVPSAHLCLKCDKSFSRWSNLQRHRKKCDPEHERLAPSKNGRPVMRAQASEG
GAGHEEDVAAQESATSGELQCPEEQALDHQGESVAGSQSPDQGLTCEMIFNMMDK
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgctgaggtccctgcaccttctgggcacttcacccagatcaaagagcagaag
ttgaagcctggagacctagaggaggaaaaagaggaggatggggcacaaagagtggaaacc
ccggagggagctgcccaggagtcagaggctgacaacagctgcctgcttctggatgcgagt
ccccaggagctgccttcaaggacagagagcgataggcggattctgaccctgcaaaccgtg
cacctggcgtcccaggatgtgcacctacaggggttgggatggctgagcctgccacactcc
gaggaacgtccaggaacggtaccacagacggaaggcatactgcagttgccatccgtgctg
tggcttgacccagagcccgagctcagccttcagcattgcgtgaccgtcagcatcccggaa
gagctgtacccaccagaggagctggaactgatgcattttcacctgctgcaggagaacgta
ctggtgaccgaggagaatcaagagttaccgccaaacttggacgaaagcacagccccgaag
aagcccaaagaagatgaaaaagaggaccagctcctgccccagggagggacagacaagaaa
gaagagagattcctctttgtggaaatggaaccaaatgaaggaaaagacgaaatcgttctg
agcatttcccatctaagcctagaagagaagcaagatccaccagcgccaccagtgccaaag
caaacgagtgtgccgagagccaaagccacaaaaccagagcctggaaggctgaccaaggga
aaacctcagaccttccagtgtgaaacctgcccgttcacttcttccaaactctcaactttc
aatcgtcacatcaaaattcacagcgacgagcggccacacctgtgccacctgtgtctgaag
gccttccggaccgtcactctccttaggaaccatgtcaacacccacacaggaaccaggccc
tacaagtgtggggactgcgacatggcgtttgtcaccagcggagaactcgtccggcacagg
cgttacaaacacactcatgagaagcccttcaagtgctcccagtgcaagtatgccagcgtc
gaggcaagcaagctgaagcgccatatgcgctcacacacgggggaacgtcccttccagtgc
tgccagtgtgcttatgccagcaaggacacctacaagctgaagcgccacatgcggacacac
tcaggtgagaagccgtacgaatgccccacctgccacgtccggttcacccagagtgggacc
atgaaaatccatatggcccagaagcatggcgagaatgtacccaaacacaagtgtccccac
tgtgccaccatcattgcgaggaagagcgacctgcgcgtgcatctgcggaacctgcacggc
cacagctccgaggagatcaagtgccgatactgtcctgctggcttccatgagcgctatgcc
ctcattcagcaccagaggacccacaagaatgagaagaagttcaagtgcaagcagtgtgat
tacgcgtgcaagcaggaacggtgcttgacagcgcacatgcgcacgcacacgggagagaag
cccttctcctgcctgccctgcaacaaacacttccggcggaagcagctacttaccgagcac
ctgaggaaggaccacgaccccagcttcgtccccagtgcgcacctatgcctcaagtgcgat
aaaagtttctcccgctggagtaacctgcagagacacagaaagaagtgtgacccggagcac
gagaggttagctccctccaagaacggaagaccagtgatgagggcccaggcctcggaggga
ggagcaggacatgaggaagatgttgccgcccaggagagtgccacctcaggggaacttcag
tgccctgaggagcaggctctggaccaccaaggagaaagtgtggcggggagccagagccca
gaccaaggcctgacctgtgagatgatctttaacatgatggataagtga
DBGET
integrated database retrieval system
