Mastomys coucha (southern multimammate mouse): 116092904
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Entry
116092904 CDS
T07224
Symbol
Sox3
Name
(RefSeq) transcription factor SOX-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116092904 (Sox3)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116092904 (Sox3)
BRITE hierarchy
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116092904
NCBI-ProteinID:
XP_031229759
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Position
X
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AA seq
446 aa
AA seq
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MRPARENASGERSPRGPADFPRSPSASLPFPPELPARRPPSATPTESPGLFTVAAPAPGA
PSPPATLAHLLPAPAMYSLLETELKNPVGPPAPAAGTGGPPAPGAAGKSGANPAGGANAG
SGSGGGANGGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWK
LLTDAEKRPFIDEAKRLRAVHMKEYPDYKYRPRRKTKTLLKKDKYSLPGGLLPPGAAAAA
AAAAAAAAAASSPVGVGQRLDTYTHVNGWANGAYSLVQEQLGYAQPPSMSSPPPPPALPQ
MHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGMAPSAAAAAAAYGQQPAAAAAAA
AAAAMSLGPMGSVVKSEPSSPPPAIASHSQRACLGDLRDMISMYLPPGGDAADAASPLPG
GRLHGVHQHYQGAGTAVNGTVPLTHI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccagctcgagagaacgcatcaggtgagagaagcccgcgcggtcccgccgacttt
ccgcggagcccttccgcaagcttgcccttcccgcccgagctgccggcccgccggcccccg
agtgccactccgacggagtcccccggccttttcaccgtggccgctccagccccgggagcg
ccttctcctcccgccacgctggcgcacctccttcccgccccggcgatgtacagcctgctg
gagactgaactcaagaaccccgtgggaccgcccgccccagccgcgggcaccggcggcccc
ccagctccgggcgctgcgggcaagagtggcgcgaacccagccggcggcgcgaacgcaggc
agcgggagcggcgggggcgcgaacggcggcggcggcggcgggggcagcgaccaggaccgc
gtcaagcgacccatgaacgctttcatggtgtggtcccgcgggcagcggcgcaagatggcc
ctggagaaccccaagatgcacaactccgagatcagcaagcgcctgggcgccgactggaaa
ctgctgaccgacgcggagaagcggccgttcatcgacgaggccaagcggctgcgtgcggtg
cacatgaaggagtacccggactacaagtaccggccccgccgcaagaccaagacgctgctc
aagaaggacaagtactcgctgcccggcggcctcctgcccccgggcgccgccgccgccgcc
gccgctgccgccgccgccgccgccgccgccagcagcccggtgggcgtgggccagcgcctg
gacacgtacacgcacgtgaacggctgggccaacggcgcctactcgctcgtgcaggagcag
ctgggctacgcgcagcccccgagcatgagcagcccgccgccgccgcccgcgctgccgcag
atgcaccgctacgacatggccggcctgcagtacagccccatgatgccgccgggcgcccag
agctacatgaacgccgcggccgccgccgccgccgcctcgggctacgggggcatggcgccc
tccgccgcggccgccgccgccgcctacggccagcagcccgccgccgccgcggccgccgcc
gccgccgccgccatgagcctgggccccatgggctccgtggtgaagtcggagcccagctcg
ccgccgcccgccatcgcttcgcactcgcagcgcgcgtgcctcggcgacctgcgcgacatg
atcagcatgtacctgccacccggcggggacgcggccgacgccgcctctccgctcccgggc
ggccggctgcacggcgtgcaccagcactaccagggcgcggggactgcggtcaatggaacg
gtgccgctgacccacatctga
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