Mastomys coucha (southern multimammate mouse): 116092941
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Entry
116092941 CDS
T07224
Symbol
Dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116092941 (Dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116092941 (Dhx36)
03012 Translation factors [BR:
mcoc03012
]
116092941 (Dhx36)
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116092941 (Dhx36)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116092941 (Dhx36)
Translation factors [BR:
mcoc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116092941 (Dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
AAA_22
AAA_19
nSTAND3
PhoH
ATPase
AAA_14
AAA_23
NPHP3_N
DUF6782
ResIII
Motif
Other DBs
NCBI-GeneID:
116092941
NCBI-ProteinID:
XP_031229837
LinkDB
All DBs
Position
Unknown
AA seq
1000 aa
AA seq
DB search
MSYDYHQSWSRDGGPRGSGQGSDSGGGGSQGSGGGGRGRGGRSRHPGHLKGREIGLWYAR
KQTQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKDSEAQISWFAPEDHGYGTEV
SSEKKINSEKKLDNQEKKVLNQEKKTFRTTDKSYIDRDSEYLLQENEPNLGLDQQLLEDL
QKKKTDPRYIDMQHFRKKLPSYGMQKELVNLINNHQVTVISGETGCGKTTQVTQFILDNY
IERGKGSACRIVCTQPRRISAISVAERVAAERAESCGNGNSTGYQIRLQSRLPRKQGSIL
YCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLHFRSDLKVILMSAT
LNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFMQGHVN
RQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRYIVLEEED
GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV
IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP
GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVV
LSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFK
DPFVIPLGKEKIADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEYFLSS
NTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRL
NLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPY
CLLFFGGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDTLLQEKIECPHPVD
WNDTKSRDCAVLSAILDLIKTQEKATPRNLPPRSQHGYYS
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactatcatcagagctggagccgcgatgggggcccacggggctccggccag
ggctccgacagcggtggtggagggagccagggctccggcggcggcggaaggggccgcggc
ggccggagccgacatcccggacaccttaagggtcgcgagatcggcctgtggtacgccagg
aagcagacgcagaagaacaaggaggctgagcggcaggagagagctgtagtgcacatggat
gaacggcgagaagagcaaattgtgcagctgctaaattcagtccaagctaagaatgataaa
gattcagaagcacagatatcctggtttgctcctgaggatcatgggtatggtactgaagtt
tcttcagagaaaaaaataaactcagagaagaaacttgacaaccaggaaaagaaagtgctg
aaccaagaaaaaaagacatttaggaccacagacaaatcatatattgacagagattctgag
tatttattgcaagaaaatgagccaaacctaggcttagatcaacaattattggaagattta
caaaagaaaaaaactgacccccggtatatagacatgcagcatttcagaaaaaagttgcct
tcatatggaatgcagaaggagctggtaaatttaatcaataaccatcaggtgacagtgata
agtggtgaaactggttgtggcaaaaccactcaggttacgcagttcatcttggataactac
atcgaaagaggaaaaggttctgcctgcagaatagtttgtactcagccaagaagaattagt
gccatttcagttgctgagagagtggctgcagaaagggcagagtcttgtggcaatggtaat
agtactggataccagattcgtctccaaagtcggttgccaaggaaacaaggttctatctta
tactgtacaacaggaatcattcttcagtggctccagtcagactcacgtttgtccagtgtc
agccatattgtacttgatgaaattcatgaaaggaatctacagtcagatgttttaatgact
gttattaaagatcttctccattttcgatctgatcttaaagtaatattgatgagtgcaacc
ttgaatgctgagaaattttcagaatattttggtaactgtccaatgatacatatacctggg
tttacttttccagttgtggaatatcttttggaagatatcattgaaaaaataagatatgtt
ccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcagggtcatgtaaac
agacaagaaaaagaagaaaaagaggccatctataaggaacgctggccagcttatataaag
gaactgcggacaagatattctgcaagtactgtagatgttttgcaaatgatggatgatgat
aaagtggatctgaatttgattgctgcccttattcgatacattgttttggaagaagaggat
ggtgcaatattggtctttctaccaggctgggataatatcagtactttgcatgatctcttg
atgtcacaagtgatgtttaaatcagataagtttctaattatacctttacattcactgatg
cctactgtaaaccagacacaggtatttaaaaaaactcctcccggtgttcggaaaatagta
attgctaccaacattgcagagactagcatcaccatagatgatgtggtttatgtaatagat
ggagggaaaattaaagaaacacactttgacacacagaacaacatcagtaccatgtctgct
gagtgggttagtaaagctaatgccaaacagcggaaagggagagctggaagagttcagcct
ggtcattgttatcatctgtataatggtcttagagcaagtcttctagatgactaccaacta
ccagaaattttgagaactcctttggaagaactttgtttgcaaataaagatcttgagactg
ggtggaattgcttattttctgagtaggttaatggatccaccatcaaatgaggctgtagtg
ctctccataaaacacctaatggaactgagtgctttggataagcaagaagaattgacacct
cttggcgtccatttagcccgcctgcctgttgagccacatattggaaaaatgattctcttt
ggagctttgttctgttgcttagatccagtcctcaccattgctgccagtctcagctttaaa
gatccctttgtcattccattgggaaaagaaaagattgcagatgcaagaagaaaggaactg
gcaaaggaaactagaagtgatcacctgacagttgtgaatgcatttgagggctgggaagaa
gccaaacgacgtggtttcagatatgaaaaggactattgctgggaatattttctgtcttca
aacacactacagatgctgcataacatgaagggacagtttgctgagcatcttcttggagct
ggatttgtaagcagtagaagtcccaaagatccaaaggctaatataaattcagataatgag
aagataattaaagctgtcatctgtgctggtttatatcccaaagttgctaaaattcgacta
aatttgggtaaaaaaaggaaaatggtgaaagttcacacaaagtctgatggtctggtttca
attcatcctaagtctgtcaatgtggagcagacagacttccactacaactggcttatctat
cacctgaagatgagaacaagcagtatatacttgtacgactgtacagaagtttcaccatac
tgcctcttgttctttggaggagatatttccatccagaaagataaggatcaggaaattatt
gctgtagatgaatggattgtgtttcagtctccagaaagaattgcccatcttgttaaggga
ctaagaaaggaactggatacccttctacaagagaagattgaatgccctcatcctgtcgac
tggaatgacactaagtccagagactgtgcagtactctcagctattctagacttaatcaaa
acacaagaaaaggctactccaaggaacttgccaccacggtcacagcatggatattacagc
tga
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