Mastomys coucha (southern multimammate mouse): 116092984
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Entry
116092984 CDS
T07224
Symbol
Smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116092984 (Smc4)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
116092984 (Smc4)
Condensin II
116092984 (Smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
DUF192
Fez1
ATG17_like
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116092984
NCBI-ProteinID:
XP_031229925
LinkDB
All DBs
Position
Unknown
AA seq
1285 aa
AA seq
DB search
MRRKGTKPSTACHQEEGPPPSQDGAHSEGEMQPAGGADCAASAETPGEELDNRSLEEILS
SIPPPPLPAMASEAGAPRLMITHIVNQNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVI
DSMLFVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSSF
YVSRTAYRDNTSVYHISGKKKTFKDVGDLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQ
TEHDEGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKN
IAIEFLTLENEIFKKKNHICQYYIYDLQNRIVEMKTQKEKIHEDTKEITEKSNALSNEMK
AKSSAVKDVEKKLNKVTKFIEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKE
KVEELKSIPAKSENIINETTTRNNSLEKEKEKEEKKLKEVMDSLKQETQGLQKEKEIQEK
ELMGFNKSVNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALLTASETLKERKAAIKD
INTKLPQTQQELKEKEKYLQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAI
IQEKKSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHNI
GIATFIGLDKMAVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVADNLDQ
ATRVAYQKDRRWRVVTLQGQIIEQSGTMSGGGSKVMRGRMGSSVIDEISVEEVNKMESQL
ERHSKQAKQIQEQKVQHEEEVVKLRHSEREMRNTLEKFTASIQGLSEQEEYLCVQIKELE
ANVLTTAPDKKQQKLLEGNVSVFKKEYDAVAEKASKVEAEIKRLHDTIIDINNRKLKAQQ
SKLDTINKQLDECASAITKAHVAIKTADRNLKKAQDSVCRTEKEIKDTEKEMNDLKTELK
NIEDNAEEVIKNTKAAESSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKLEQIDG
HISEHNSKIKYWQKEISKIKLHPVEDNPVETVSVLSQEDLEAIKNPDSITNQIALLEAQC
REMKPNLGAIAEYKKKEELYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYVIT
NKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLAL
VFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLI
GIYKTYNITKSVAVNPKQIASKGLC
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgtaagggcaccaagccctccactgcctgccaccaggaggaagggccgcccccc
tcccaggacggtgcacacagcgaaggagagatgcaaccggccggcggggcggactgcgct
gcgtccgcagagactccaggtgaggagcttgataacagaagtttagaagagattttgagt
agtattcctccacccccacttccagcaatggccagtgaagctggagctcctcggcttatg
ataactcatattgtaaaccaaaacttcaagtcctatgctggagagaaaattctgggacct
ttccataagcgcttttcctgtattattggaccaaatggcagtggaaaatccaatgttatt
gattccatgctttttgtttttggctatcgagcacaaaaaataaggtctaaaaagctgtct
gtactgatacataattctgatgaacacaaggatattcagagttgtactgtagaagttcat
tttcaaaagataattgataaggaaggagatgattatgaagtccttcctaacagcagcttc
tatgtatctagaacagcctacagagataatacttctgtttatcatataagtgggaagaag
aagacatttaaagatgttggagatcttcttagaagccatgggattgacttagaccataat
cgatttttaatcttgcagggtgaagttgaacagattgctatgatgaaacctaaaggccag
actgaacatgatgaaggtatgcttgaatatttagaagatataattggctgtggacggcta
aatgaacctattaaagtcttgtgtcggagagttgaaatattaaatgaacacagaggagaa
aagttaaacagagtaaaaatggtagaaaaggagaaggatgcactagaaggagagaaaaac
atagccattgagttccttaccctggaaaatgaaatatttaagaaaaagaatcacatctgt
caatactacatttatgatctgcaaaatagaattgttgaaatgaagactcaaaaggaaaaa
attcatgaagacaccaaagaaattactgagaagagtaatgcactttccaatgaaatgaaa
gctaagagttcagctgtaaaggatgtagaaaagaaactcaataaagttacaaaatttatc
gaacagaataaagaaaaatttacacagctagatttggaagatgttcaagttagggaaaag
ttaaaacatgctacaagtaaagccaaaaaactggagaaacaacttcaaaaagataaagaa
aaggttgaagagctgaaaagtatacctgccaagagtgagaatatcataaatgagacaaca
actagaaacaattctcttgagaaagaaaaagagaaagaagaaaaaaaattaaaagaggtc
atggacagccttaaacaggaaacacaggggcttcagaaagaaaaggagattcaagaaaag
gaacttatgggttttaacaaatcagtaaatgaagcacgttcaaagatggaagttgcacag
tcagaacttgatatctatctcagtcgacataatacagcagtatctcagttaagtaaggca
aaggaagctttactcacagcttctgagactctcaaggaaaggaaagctgcaatcaaggat
ataaacacaaagctccctcagactcaacaagaattaaaggagaaagaaaaataccttcag
aaactgacacaagaagaaataaacttaaagagtttggttcatgatcttttccaaaaagtt
gaagaagcaaagagttccttagcaatgaatcgaagtagggggaaagtacttgatgcaata
attcaagaaaaaaaatcaggcaggatcccaggaatatatggaagattgggagacttagga
gctattgatgaaaaatatgacattgctatttcatcctgttgccatgcattggactacatt
gttgttgattctattgatacagcccaggaatgtgtaaatttccttaaaaaacataatatt
ggaattgcaactttcataggtttggataaaatggcagtgtgggccaagaaaatgagcaaa
attcaaactcctgaaaatactcctcggttatttgatttagttaaagtaaaaaatgaggaa
atccgccaagctttttactttgctttacgtgataccttggtggctgacaatttggatcaa
gctacaagagtagcatatcaaaaagacaggcgatggagagtagtaactctacaggggcag
atcatagagcagtcaggtacaatgagtggtggtggaagcaaagtgatgagaggaagaatg
ggttcttcggttatcgatgaaatctctgtagaagaggtaaataagatggaatcccagttg
gaaaggcattctaaacaagcaaagcaaatccaagaacagaaagtacaacatgaagaagaa
gtagttaagctaaggcatagtgaacgagaaatgagaaatacactagagaagtttactgca
agcatccagggtttatcagaacaagaagaatatttatgtgtacaaattaaagaactggaa
gctaatgtgcttactacagcccctgataaaaaacagcagaaattgctcgaaggaaatgtc
agtgttttcaaaaaagaatatgatgctgtggctgagaaagccagtaaagttgaagctgag
attaaacggctacacgataccatcatagatatcaacaaccgaaaactcaaggcccaacaa
agcaaacttgacacaataaataagcagctggatgaatgtgcatctgctattactaaagcc
catgtagcaatcaagactgctgatagaaatcttaaaaaggcacaggattctgtttgccgc
acagagaaagaaataaaagacactgaaaaagaaatgaatgacttaaaaacagaactaaaa
aatattgaagacaatgcagaagaggtcataaaaaatacaaaagctgcagagagctcctta
ccagaaatccagaaagaacatcgtaatctacttcaggaactaaaagttattcaagaaaat
gaacatgctcttcagaaagacgcacttagtattaagttgaaacttgagcagatagatggc
cacatttctgaacataactcaaaaataaaatactggcaaaaagagatttcaaaaataaaa
ttgcatcctgttgaagataatcctgttgagacagtatcagttctaagccaagaggatctt
gaggcaatcaagaatccagattctataacaaatcaaattgcacttttggaagctcagtgt
cgtgaaatgaaaccaaaccttggtgccatcgctgagtataaaaaaaaggaagaattatat
ttgcaaagagtagccgaactggacaaaattacttctgaaagagataattttagacaagca
tatgaagatcttcgaaaacaaaggctaaatgaatttatggctggtttttatgtaataaca
aataaactaaaagaaaactaccagatgctcacgttgggaggggatgctgaactggagctt
gtggatagtttagatcctttttctgaaggaatcatgttcagtgttcggccacctaagaaa
agctggaagaagatctttaacctttcaggaggcgagaaaacccttagttcattggcgtta
gtgtttgctcttcaccactacaagcccactcccctctacttcatggatgagattgatgca
gctctggattttaaaaatgtgtctattgttgcattttacatatatgagcaaacaaaaaat
gcccagttcataataatctctcttcgaaataatatgtttgagatttcagatagacttatt
ggcatctataaaacatataatattacaaaaagtgttgcagtgaacccaaaacaaattgca
tctaaaggactctgttga
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