Mastomys coucha (southern multimammate mouse): 116093362
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Entry
116093362 CDS
T07224
Symbol
Rorc
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04659
Th17 cell differentiation
mcoc04710
Circadian rhythm
mcoc05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
116093362 (Rorc)
09159 Environmental adaptation
04710 Circadian rhythm
116093362 (Rorc)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
116093362 (Rorc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116093362 (Rorc)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcoc03310
]
116093362 (Rorc)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116093362 (Rorc)
Nuclear receptors [BR:
mcoc03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
116093362 (Rorc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116093362
NCBI-ProteinID:
XP_031230560
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MDRVPQRHPHRTSRELLAAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQ
QCNVAYSCTRQQNCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQ
KQLQQQQQREQVAKTPPTGSPGADTLTYTLGLSDGQLPLGASPDLPEASACPPGLLRASG
SGPPYSNTLAKTEVQGASCPLEYSPERGKAEGRDSIYSTDSQLSLGRCGLHFEESRHPEL
GEPEQGPDSHCSPSFCSVPEAPYASLTDIEYLVQNVCKSFRETCQLRLEDLLRQRTNLFS
REEVTSYQRKSMWEMWERCAHHLTEAIQYVVEFAKRLSGFMELCQNDQIILLKAGAMEVV
LVRMCRAYNANNHTVFFEGKYGGVELFRALGCSELISSIFDFSHFLSALCFSEDEIALYT
ALVLINANRPGLQEKRRVEHLQYSLELAFHHHLCKTHRQGLLAKLPPKGKLRSLCSQHVE
KLQIFQHLHPIVVQAAFPPLYKELFSTDVESHEGLSK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggacagggtcccacagagacacccccaccgaacatctcgggagctgctggctgcaaag
aagacccacacctcacaaattgaagtgatcccttgcaagatctgtggggacaagtcatct
gggatccactacggggttatcacctgtgaggggtgcaagggcttcttccgccgcagccag
cagtgtaatgtggcctactcctgcactcgtcagcagaactgccccattgaccgaaccagc
cgcaaccgatgccagcattgccgcctgcagaagtgcctggctctgggcatgtcccgagat
gctgtcaagttcggccgaatgtccaagaagcagagggacagtcttcatgcagaagtgcaa
aaacaactgcaacagcagcagcaacgggagcaagtggccaagacccctccaactgggagc
cccggagcagacacccttacatacactttagggctctcagatgggcagctaccactgggc
gcctcacctgacctgcccgaggcctctgcttgtccccctggcctcctaagagcctcaggc
tctgggccaccatattccaataccttggccaaaacagaggtccagggggcctcctgcccc
cttgagtatagtccagaacgaggcaaagctgaaggcagagacagcatctatagcactgac
agccagctttctcttggaagatgtggacttcattttgaggaatccaggcatcctgagctt
ggggaaccagaacagggtccagacagtcactgtagtcccagtttctgcagtgtccctgag
gcaccatatgcctctctgacagacatagagtacctggtacagaatgtctgcaagtccttc
cgagagacgtgccagctgcgactggaggaccttctacggcagcgtaccaacctcttctca
cgggaggaggtgaccagctaccagaggaagtcaatgtgggagatgtgggagcgctgtgcc
caccacctcactgaggccattcagtatgtggtggagtttgccaagcggctttcaggcttc
atggagctctgccagaatgaccagatcatactactgaaagcaggagcaatggaagtcgtc
ctagtcagaatgtgcagggcctacaatgccaacaaccatacagtcttttttgaaggcaaa
tacggtggtgtggagctgtttcgagccttgggctgcagcgagctcatcagctccatattc
gacttttcccacttcctcagtgccttgtgtttttctgaggatgagattgccctctacaca
gccctggttctcatcaatgccaaccgtcctgggctccaagagaagaggagagtggagcat
ctgcaatacagtttggagctggccttccatcatcatctctgcaagactcaccgccaaggc
ctcctcgccaagctgccacccaaagggaagctccggagcctgtgcagccaacatgtggaa
aagctgcagatcttccagcacctccaccccatcgtggtccaagctgccttccctccactc
tataaggaactcttcagcactgatgttgagtcccatgaggggctgtcaaagtga
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