Mastomys coucha (southern multimammate mouse): 116093397
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Entry
116093397 CDS
T07224
Symbol
Sema6c
Name
(RefSeq) semaphorin-6C isoform X1
KO
K06842
semaphorin 6
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116093397 (Sema6c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Alpha_GJ
Motif
Other DBs
NCBI-GeneID:
116093397
NCBI-ProteinID:
XP_031230631
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MPRAPHSMPLLLLLLLSLPQAQAAFPQDPIPLLTSDLQGTSPSSWFRGLEDDAVAAELGL
DFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKFLTWRSQDMENCAVRGKLTDEC
YNYIRVLVPWDSQTLLACGTNSFSPMCRSYGIASLQQEGEELSGQARCPFDATQSTVAIF
AEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVYALEHGEHVYFFFR
EVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFDVLQ
SLTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDIERGFEGKFKEQRSLDGAWTPVS
EDKVPSPRPGSCAGVGAAALFSSSQDLPDDVLLFIKAHPLLDPAVPPATHQPLLTLTSRA
LLTQVAVDGMAGPHRNTTVLFLGSNDGTVLKVLPPGGQSLGPEPIILEEIDAYSHARCSG
KRSPRAARRIIGLELDTEGHRLFVAFPGCIVYLSLSRCARHGACQRSCLASLDPYCGWHR
LRGCVNIRGSGGTDVDLTGNQESMEHGDCQDGATGSQSGPGDSAYVLLGPGPSPETPSSP
SDAHPGPQSSTLGAHTQAPTIRLSLLPPSRSAGVRRDLPPASASRSIPIPLLLACVAAAF
ALGASVSGLLVSCACRRANRRRSKDIETPGLPRPLSLRSLARLHGGGPEPPPPPKDGDAA
QTPQLYTTFLPPPEGGSPPELACLPTPETTPELPVKHLRASGGPWEWNQNGNNASEVPGR
PRGCSAAGGPAPRVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKGSEPLASAPFAS
RPPASEPGAAPFVDSSPRSRDCVPPVRLDVPPDGKRAAPSGRPALSAPAPRLGVGGSRRL
PFPTHRAPPGLLTRVPSGGPARYSGGPGRHLLYLGRPDGHRGRSLKRVDVKSPLSPKPPL
ASPPQLAPHGGHFNF
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgccccgtgccccccactccatgcccttgctgctgctgttgttgctgtcactcccccaa
gcccaggctgcctttccccaggaccctatccctctgttgacctctgacctgcaaggtacc
tctccatcatcctggttccggggcctggaggacgatgctgtggctgcggaacttgggctg
gactttcagagattcctgaccttgaaccggaccttgcttgtggctgcccgggatcacgtt
ttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaacaagtttctg
acatggaggagccaagatatggagaattgtgctgtccggggaaagctgacggacgaatgc
tacaactacatccgtgttcttgttccctgggactcccagacactccttgcctgtggaaca
aattccttcagccctatgtgccgcagctatgggatagcatctctgcaacaggagggtgag
gagttgagtgggcaagctcgatgcccctttgatgccacccagtccactgtggccatcttt
gcagagggcagtttgtactcagccacagcagcagatttccaagctagtgatgctgtagtt
tacagaagtcttggacctcagcccccgctccgttctgcaaagtatgactccaagtggctg
cgagagccacactttgtctatgctttggagcacggagagcatgtctacttcttcttcaga
gaagtctctgtggaggatgcccgtctggggagggtgcagttttcccgggtagcccgggtg
tgtaaacgtgacatgggtggctcacctcgggccttggatcgccactggacatccttcctt
aagctgaggctcaactgctctgtccctggggactctaccttctactttgacgtcctacag
tccttaaccgggcctgtgaacctgcatggccgctctgctctctttggggtcttcactact
cagaccaatagcattcctgggtctgcagtctgcgccttctacctagatgatattgaacgt
ggctttgagggcaagttcaaggagcagaggagtctggatggggcctggactcctgtgtct
gaggacaaggtcccctcacccaggccagggtcctgtgcaggtgtgggtgcagctgccttg
ttctcctcctctcaagacctacctgatgatgtcctgctcttcatcaaggcacacccgttg
ctggatccggcagtgccgcccgccacccatcaaccgctcctcactctgactagcagggct
ctcctgacccaggtagctgtggacggtatggctggtccccacagaaatactaccgtcctg
tttcttggctccaatgatgggacagtgctgaaggtgctacctccagggggacagtctctg
ggacctgagcctatcatattggaagagattgatgcctacagccatgcccggtgcagtggg
aagcggtctccccgagctgcacggcggatcatagggctggagctggacactgagggtcac
aggctttttgtggcctttcctggatgtatcgtctacctctctctcagccgctgtgcccgg
catggagcatgtcagaggagctgcctggcttctctggacccttactgtggatggcatcga
ctcagaggctgcgtgaatatcaggggatctggtgggactgatgtagatctgactgggaac
caggaatccatggaacatggtgactgccaagatggagcgactgggagtcagtctggaccc
ggagattctgcttatgtgcttctgggtcctggcccttcccctgagacccccagttccccc
agtgatgcccacccagggccccagtcttccactcttggagctcacacgcaggcacctacc
ataaggctgagcctcctccctccttctcggtcggcaggcgtgcgcagggaccttccccca
gcctcagcctcccgatccatccccatcccactcctcctggcctgtgtggcggcggccttc
gcattgggcgcctcagtctccggcctcttggtgtcctgtgcttgtcgtcgcgcgaaccgc
cgtcggagcaaggacatcgagaccccggggctgccgcgccccctctcccttcgcagtctg
gcgcggctgcacggtggcggtcctgagcccccgcctccgcccaaggatggagatgcagcg
caaacgccccagctctacaccaccttcctgcccccgcccgagggcggatccccaccggag
ctggcctgcctgcccaccccggagactacgcccgagctgccggtgaagcatctccgtgcc
tccgggggtccctgggagtggaaccagaacgggaacaacgcctcggaggtcccaggccgc
ccacggggctgcagcgcggcgggcgggcccgccccgcgcgtgctggtgaggcccccgccc
cctggctgccccgggcaggcggtggaggtgaccacgctggaggaactgctgcgctacctg
cacggcccgcagccgcccaggaagggcagtgaacctctcgcctccgccccgttcgcctct
cggccgcctgcctcggagcccggcgccgccccgttcgtggactccagcccgaggtcgcgg
gattgcgtgccgcccgtgaggcttgacgtgccgcccgacggcaagcgcgcggcccccagc
gggcggcccgcgctctcggccccggctccgcgcctgggggtcggcggcagccgcaggttg
cccttccccacgcaccgggcgcccccgggcctgctcacgcgagtcccgtcaggaggcccg
gccaggtactccggggggcccgggaggcacctcctgtacttaggccggcccgacggccac
cgcggccgctccctgaagagggtggacgtgaagtctccgctgtcgcccaagccgcccctc
gcctccccgccgcagctcgccccgcacggcggccattttaacttctga
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