Mastomys coucha (southern multimammate mouse): 116093428
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Entry
116093428 CDS
T07224
Symbol
Prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116093428 (Prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116093428 (Prpf3)
Spliceosome [BR:
mcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116093428 (Prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
116093428
NCBI-ProteinID:
XP_031230708
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTPSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEVELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLTPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDEEESDEEAVKKTNKCALVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtctaagcgggagctggatgagctgaaaccatggattgagaagacagtgaag
agagtactgggtttttcagagcccacggtggtcacagcagcgttgaactgtgtggggaag
ggcatggacaaaaagaaggcggctgatcacctgaaaccttttcttgatgattccactctc
cgatttgtggataagctgtttgaagctgtggaggaaggccgaagctcaagacattccaag
tctagcagtgacagaagcagaaagcgagagttaaaggaggtgtttggtgatgactctgag
atctcaaaggaatcatcgggggtaaagaagcggcgaataccccgttttgaggaagtagaa
gaggagccagaagtgatccctggacctccgtcagaaagccccggcatgctaacaaagctc
cagatcaaacagatgatggaggcagcaacacgacaaatcgaggaacggaaaaaacagctg
agctttatcagcccccctacacctcagccaaagacaccttcttcttcccaaccagagcgg
cttccaattggtaacactattcagccctcccaggctgctacctttatgaatgatgccatt
gagaaggcaaggaaagctgctgaactgcaagcccgaatccaggcccagctggcattgaag
ccagggcttattggcaatgccaacatggtgggcctcgctaatctccatgccatgggcata
gctccaccgaaagtagagttaaaagatcagactaagcctaccccacttatcctggacgag
caaggccgcactgtagatgcgacaggcaaggaggtggagctcacacatcgcatgcccacc
ctgaaggcaaacattcgggctgtgaagagggaacagttcaagcagcagctaaaagaaaag
ccgtcagaagacatggagtctaacaccttttttgacccccgagtctcaattgccccttcc
cagcgccaaagacgcacttttaaattccatgacaagggcaaatttgagaagattgctcaa
cgattacggacaaaggctcaattggagaagctgcaagcagagatttcacaggctgctaga
aaaacaggcattcatacttcaactagacttgccctcattgctcctaaaaaggagctaaag
gaaggcgatatccctgagatcgagtggtgggactcatacatcatacccaacggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
ccagcccagcttaaccctccagttgacaatgatacaccagttactcttggggtatatctt
acaaagaaggagcagaagaaacttcggaggcaaacaaggagggaggcacagaaggagcta
caagagaaagtcagactaggcctgacacctcctccagagcccaaagtgagaatctcaaat
ttaatgcgagtattaggaactgaagcagttcaagaccctacaaaggtagaagcccatgtc
agagctcagatggcaaagagacagaaagcgcatgaagaggccaatgctgcccgaaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtgcacatatctgtgtatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcagctgtacctgacaggggtggtggtgctgcacaaggatgtcaac
gtggtggtagtagaagggggccccaaagcccagaagaaatttaagcgcctcatgctacat
cggataaagtgggatgagcagacatctaacacaaagggagatgatgaggaggaatctgat
gaagaagctgtgaagaaaactaacaagtgtgcgctagtgtgggagggtacagccaaagac
cggagctttggagagatgaagtttaaacagtgccctacagagaacatggctcgtgagcat
ttcaaaaagcatggggctgaacactactgggaccttgcactgagtgaatctgtgttggag
tccacagactga
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