Mastomys coucha (southern multimammate mouse): 116093623
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Entry
116093623 CDS
T07224
Symbol
Sort1
Name
(RefSeq) sortilin isoform X1
KO
K12388
sortilin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04142
Lysosome
mcoc04722
Neurotrophin signaling pathway
mcoc04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116093623 (Sort1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
116093623 (Sort1)
09156 Nervous system
04722 Neurotrophin signaling pathway
116093623 (Sort1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
116093623
NCBI-ProteinID:
XP_031231039
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MERPRGAADGLLRWPLGLLLLLQLLPPAAVGQDRLDAPPPPAPPLLRWAGPVGVSWGLRA
AAPGGLVPRAGRWRRGAPAEDQDCGRLPDFIAKLTNNTHQHVFDDLSGSVSLSWVGDSTG
VILVLTTFQVPLVIVSFGQSKLYRSEDYGKNFKDITNLINNTFIRTEFGMAIGPENSGKV
ILTAEVSGGSRGGRVFRSSDFAKNFVQTDLPFHPVTQMMYSPQNSDYLLALSTENGLWVS
KNFGEKWEEIHKAVCLAKWGPNNIIFFTTHVNGSCKADLGALELWRTSDLGKTFKTIGVK
IYSFGLGGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSILAANEDMVF
MHVDEPGDTGFGTIFTSDDRGIVYSKSLDRHLYTTTGGETDFTNVTSLRGVYITSTLSED
NSIQSMITFDQGGRWEHLQKPENSKCDATAKNKNECSLHIHASYSISQKLNVPMAPLSEP
NAVGIVIAHGSVGDAISVMVPDVYISDDGGYSWAKMLEGPHYYTILDSGGIIVAIEHSNR
PINVIKFSTDEGQCWQSYVFTQEPIYFTGLASEPGARSMNISIWGFTESFITRQWVSYTI
DFKDILERNCEEEDYTTWLAHSTDPGDYKDGCILGYKEQFLRLRKSSVCQNGRDYVVAKQ
PSVCPCSLEDFLCDFGYFRPENASECVEQPELKGHELEFCLYGKEEHLTTNGYRKIPGDR
CQGGMNPTREVKDLKKKCTSNFLNPTKQDSRPQGHSLSQNPAPPPLGYTENTHFLSPTQK
QNSKSNSVPIILAIVGLMLVTVIAGVLIVKKYVCGGRFLVHRYSVLQQHAEADGVEALDT
ASHAKSGYHDDSDEDLLE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggagcggccccggggagctgcggacggccttttgcgctggcccctcggcctcctcctg
ctcttgcagctgctgccgccagccgccgtcggccaggaccggctggacgctccgccgccg
cccgcgcctcctttgctgcgctgggccggtccggtcggggtgagctgggggctgcgcgcc
gccgcgcccgggggcctcgtcccccgcgctggccgttggcgccgcggcgcgcccgccgag
gaccaggactgcggccgcctcccggacttcatcgccaagctgaccaacaatacgcaccag
catgtctttgatgacctcagtggctcagtgtccttgtcctgggttggagacagcactggg
gttattctcgtcctgaccactttccaagtgccactggtgattgtaagttttggacagtcc
aagttatatcgaagtgaggattatggaaagaactttaaagacattacaaatctcatcaat
aacaccttcattcggacggagtttggcatggccattggtcctgagaactctggaaaggtg
atactaacagcagaggtgtccgggggaagccgaggaggaagagtgttcaggtcatcagac
tttgccaagaactttgtgcagacagatctcccctttcatcctgtgacgcagatgatgtac
agccctcagaattctgattacctgttagctctcagcaccgaaaatggcctgtgggtgtcc
aagaattttggggaaaaatgggaagaaatccacaaagcagtatgtttggccaaatgggga
ccaaacaacatcatcttctttaccacgcatgtgaatggctcctgcaaagctgatcttggt
gccctggaattatggagaacatccgacttggggaaaaccttcaaaaccattggcgtgaaa
atctactcgtttggtcttgggggccgtttcctttttgcctctgtgatggctgataaggac
acaacaagaaggatccacgtgtcaacagaccaaggggacacatggagcatggcacagctt
ccttctgtggggcaggagcaattctattctatcctggcagccaatgaggacatggtattc
atgcatgtagatgaacctggagataccgggtttggaaccatctttacctctgatgaccga
ggcattgtctactccaagtctctggacaggcatctctataccaccacaggcggggagaca
gacttcaccaacgtgacttcactccgtggagtctatataacaagcacgctctcagaagat
aactccattcagagcatgatcacttttgaccagggaggacggtgggagcacctacagaag
ccggagaacagcaagtgcgatgctaccgcaaagaacaagaatgagtgcagccttcatatc
catgcttcttatagcatctcccagaagctaaacgttccgatggcccctctctctgagccc
aatgccgtgggcatcgtcattgctcacggtagtgtgggagatgccatctcggtgatggtc
ccagatgtgtacatctcagacgatgggggttactcctgggcgaagatgctcgaaggacca
cactattacaccatcctggattctggaggcatcatcgtggccattgagcacagcaaccgt
cctatcaatgtgattaagttctccacagatgaaggccagtgctggcagagctatgtgttc
acacaggagcccatctacttcaccgggcttgcttctgagcctggagccaggtccatgaac
atcagcatctggggattcacagagtctttcattacccgccagtgggtctcctacacaatc
gatttcaaagacatccttgagcggaattgtgaggaggaggactataccacgtggctggca
cactccacagaccctggagattacaaagatggctgcattttgggctataaagaacagttc
ctacggctacggaagtcatccgtctgtcagaatggtcgagactatgttgtggccaagcag
ccatccgtctgcccgtgttccctggaggacttcctctgtgactttggctacttccgtcca
gagaatgcctcagagtgtgtggagcagccggaactgaagggacacgagttagagttctgt
ctgtatggcaaggaggagcacctgacaacaaatgggtaccggaaaatcccaggagacagg
tgccaaggggggatgaatccaacccgagaagtaaaagacttgaaaaagaaatgcacaagc
aacttcttgaaccccacaaagcaggactcccgcccacagggacacagcttatcccagaat
ccagctccgcctcctcttggatacactgaaaacacacacttcctatctcctacccagaag
cagaattccaagtcgaattctgtccctattatcctggccatcgtgggactgatgcttgtc
acagtcatagcaggagtcctcattgtgaagaaatatgtctgcggcggaaggttcctggtg
caccggtactctgtgctgcagcagcacgcagaggctgacggagtggaggccttggataca
gcctcccacgctaaaagcggttatcacgatgattcagatgaggacctcctggaatag
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