Mastomys coucha (southern multimammate mouse): 116093963
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Entry
116093963 CDS
T07224
Symbol
Msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116093963 (Msh4)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
116093963 (Msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
AAA_22
ATPase_2
AAA_30
Rad17
AAA_23
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
116093963
NCBI-ProteinID:
XP_031231775
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MRLASRLLSGAAGGLQLRSARSLARRTLGIRKAREMLRQEAASLSSSPRWTPSRAEDLCG
RTLASASRPSTEGAVADRSGSSSTASVPGSSSGNKRSYATHRVASSFPVGTSSSSARDTT
YPHTFRTPLSAGNPQRSGHKSWTPQVGYSATSSAVSAHAPSVIVAVVEGRGLARGEIGMA
SIDLKSPQIMLSQFADNTTYAKVITKLQVLSPLEIIMSNTACVVGNSTKLFTLITENFKN
VSFTTVQRKYFNETKGLEYIEQLCIAEFSSVLMEVQSRYYCLAAAAALLKYIEFIQNSVY
APKSLKIYFQGSEQTAMIDPSSAQNLELLINNQDSRSNHTLFGVLNYTKTAGGSRRLRSN
ILEPLVDVETISMRLDSVQELLQDEELFFGLQSVISKFLDTDQLLSVLVQIPKQDTVNAA
ESKITNLIYLKHTLELVDPLKVTLKNCSTPLLRAYYGSLEDHRFELILEKIKTVINDDAR
YMKGCLNMRTQKCYAVRSNISEFLDIARRTYTEIVDDIAGMIAQLAEKYSLPLRTSFSSA
RGFFIQMSTDCIALSSDQLPPEFIKISKVKNSYNFTSADLIKMNERCQESLREIYHMTYM
IVCKLLSEIYEHIHCLYKLSDAVSMLDMLQSFAHACTLSDYVRPEFTDTLAIKQGWHPIL
ERISAEKPVANDTYITEGRNVLIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYASFR
IAAQIFTRISTDDDIETNSSTFMKEMKEIAYILHNANDKSLILIDELGRGTNTEEGIGIS
YAVCEHLLSIKAFTLFTTHFLELCHIDALYLNVENMHFEVQHVKNTSRNKDAILYTYKLS
RGLTEEKNYGLKAAEASSLPPSIVLDAREITTQITRQILQNRRSSPEMDRQRAVYHLATR
LVQAARNSQLEPDRLRMYLSNLKKKYEGDFVRAGDLPEKTEE
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctagcctcccgcctgttaagtggtgcggccggaggccttcagcttcggagtgct
cgaagcctcgcgcgcagaaccttgggtatcagaaaggccagagaaatgctgagacaggag
gcggcttcgctctcgagttccccacgctggacgccgtcgcgggcggaggacctgtgcggg
aggaccctggcctccgcgtccaggccgagcacggaaggcgccgtggccgacaggagtggc
agcagcagcacggcgtccgtgccaggttcatcatctggaaacaaaagatcttatgctaca
cacagagttgcatccagttttcctgttggtacaagctcatcttctgcacgagataccact
tacccacatacatttagaactccgttatctgctggaaatccccagagatcagggcataag
agttggacaccacaagtaggatattcagccacatcctctgcggtctctgcacatgcccca
tcagtcattgtggcagtggtggaaggaagagggctggccagaggcgagataggaatggca
agcatcgatttaaaaagccctcagattatgttgtcacagtttgcagacaacacaacatat
gcaaaggtgatcactaaactccaagttttatcacctttggaaataataatgtcaaatact
gcttgtgttgtgggaaattcaaccaagttgtttactctgatcacagaaaattttaagaac
gttagtttcactacagtccaaaggaaatacttcaatgaaacaaagggcttagagtacatt
gagcagttgtgcattgctgagttcagctctgttctaatggaggtgcagtccaggtattac
tgccttgcggcggctgcagccttattaaaatacattgaattcattcaaaactcagtatat
gcacccaaatcgctgaagatttatttccaaggtagtgagcagacagccatgatagaccca
tcatcggcccagaacctggagttgttaattaataaccaggactccaggagtaatcacact
ctcttcggtgttctaaattacaccaagactgcgggagggagccgaaggctgcgctccaac
atcctggaacctctggttgatgtagagacaatcagcatgaggctggacagtgtccaggaa
ctgcttcaagatgaggagctcttctttggactccagtcagtcatatcaaaattcctggat
acggaccagctgctttctgttttagttcaaatcccaaagcaagacacggttaatgcagct
gaatcaaagataacaaacttgatctacctgaagcatacactggaactcgtggatccttta
aaggtcaccttaaagaactgtagcacgcccttactaagagcttactatggctccttggaa
gaccataggtttgaactaatacttgagaagattaaaacagtgataaatgatgatgcaagg
tacatgaagggctgcctgaacatgcggactcagaagtgctatgcagtgcgttccaacatc
agtgagttcctggacatagccaggagaacgtacacagagatagtggatgacatagcagga
atgatagcccagctcgcagagaagtacagccttcccctacggaccagcttcagctcggca
cggggcttcttcatccagatgagcactgactgtatcgccctctccagtgaccagcttcct
ccagagttcattaagatctctaaagtgaaaaactcatataactttacatcagcagattta
attaaaatgaatgaaagatgccaagagtctttgcgagaaatctatcacatgacctacatg
atcgtgtgcaagctgctcagtgagatctatgagcacatccactgcttgtacaagctctct
gatgcggtgtcaatgctggacatgctgcagtcctttgcccacgcctgtactctgtctgac
tacgttcgcccagagtttactgacactttagcaatcaaacaagggtggcatcccattctt
gaaagaatatctgcggagaaaccggttgcgaacgatacatacattacagaaggcaggaat
gttctcatcattaccggaccaaatatgagtgggaagtccacatacttaaagcagattgcc
ctctgtcagatcatggcccagattggctcctatgtcccagcagaatatgcctcctttagg
attgctgcgcaaatctttacgagaatcagtactgatgatgatattgaaacaaactcttca
acgtttatgaaagaaatgaaagagatagcatatattcttcataatgctaatgacaagtca
ctcatattaattgatgagcttggcagaggcactaatacagaagaagggattggaatttct
tatgcggtctgtgaacatctgctgagcataaaggcatttacactcttcactacccatttc
ctggaactatgccatatagatgccctgtatcttaatgtggaaaacatgcattttgaagtt
cagcatgtgaagaatacatcaagaaataaagatgcaattttgtatacttacaaactttcc
aggggacttacagaagaaaaaaactatggattaaaagctgcagaggcctcctcacttccg
ccatcgattgtcttggatgccagagagatcacaacacaaatcacaaggcaaattttgcaa
aatcgaaggagttcccctgagatggataggcagagagctgtgtaccatcttgccacaagg
cttgtccaggccgctcgaaactctcagttggagccagaccggttacggatgtatctgagt
aatctcaagaagaagtatgaaggggactttgtcagggctggggaccttccagagaagact
gaggagtaa
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