KEGG   Mastomys coucha (southern multimammate mouse): 116094959
Entry
116094959         CDS       T07224                                 
Symbol
Nxf3
Name
(RefSeq) nuclear RNA export factor 3
  KO
K14284  nuclear RNA export factor
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008  Ribosome biogenesis in eukaryotes
mcoc03013  Nucleocytoplasmic transport
mcoc03015  mRNA surveillance pathway
mcoc05014  Amyotrophic lateral sclerosis
mcoc05164  Influenza A
mcoc05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    116094959 (Nxf3)
   03015 mRNA surveillance pathway
    116094959 (Nxf3)
   03008 Ribosome biogenesis in eukaryotes
    116094959 (Nxf3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    116094959 (Nxf3)
   05168 Herpes simplex virus 1 infection
    116094959 (Nxf3)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    116094959 (Nxf3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116094959 (Nxf3)
   03009 Ribosome biogenesis [BR:mcoc03009]
    116094959 (Nxf3)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     116094959 (Nxf3)
   mRNA cycle factors
    Stress granule specific factors
     116094959 (Nxf3)
Ribosome biogenesis [BR:mcoc03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    116094959 (Nxf3)
SSDB
Motif
Pfam: Tap-RNA_bind TAP_C NTF2
Other DBs
NCBI-GeneID: 116094959
NCBI-ProteinID: XP_031232271
LinkDB
Position
X
AA seq 557 aa
MVTASHLPRSGSTLKYFNVFYTAHRFIFGSKTNPIQRRMRCQRIFRRSILNSTEHTGDTV
HTSSYKQQYGEPAMSNSLMHTRRYTPYGMPSRHQRVNLHKWNQMSVNMEGGSQPPERKIE
RDKQDDTSENWFKVTIPFGIQYDKKWLLNLFQSQCHIPFTPVQFHYEKMQAHFFVNNPNV
AFMLKAISDKIRDETDNKISVFISPCDEPPSVTELKLEKMDHKKPQSHRTPSVILQPTMK
QQCATSQRVLSRQRLPFDQDLMTHPTDLALIPRSYMAHSLTIQEKNMTQMNSEGEMVKEQ
APDPEKICADKSFLSTTMPDKSSNINSILELFPKLLSLDGQESRKPTLCGPEDHKTLPTC
KGSFFGSESIKTMVLQFLQQYFFIYDNGDRQGLLHTYHAEACFSLTVPFSSVDLCTSSLC
EYFKYSRNMKILKDPLDGSSQGCVHAFTRIFIATCGNSSDLCIINDKLSVRNAHGVPSAS
TSVVTSSSSYLPSFSQDLWEMVPTFSAQSRENVERSQKCPQGDQRNYNRAIQSLALLKVK
DTVPEDKFTQTDTRSQE
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggtcactgcctctcatctcccaagaagtggaagcacactgaaatattttaatgttttt
tacactgctcacagattcatttttggttccaaaactaaccccattcaaagaagaatgaga
tgccagcgtattttccgtaggagcattctcaactcgactgagcacactggtgatacagtg
catacttcatcttataagcagcaatatggagagccagcaatgagtaattctctcatgcat
acccgaagatacactccatatggcatgccatcccgtcatcagagagtcaatttacataaa
tggaaccaaatgagtgttaacatggaggggggctcacaacctccagagagaaaaatagag
agggacaaacaagatgatacttcagagaactggttcaaggtcacaattccctttggcata
caatatgataagaagtggctgctgaatttgtttcagagccagtgccacatccctttcact
ccggtgcagtttcactatgaaaagatgcaggcccatttttttgtcaacaatcccaacgtt
gcctttatgctgaaggctatcagtgacaagattcgagatgagactgataataagatatca
gtcttcatcagtccctgtgatgaacccccctcagtgacagagctcaagttagaaaagatg
gatcacaaaaagccgcagagtcacagaactccatctgtaattctgcagccgactatgaag
caacagtgtgctacttctcagcgagttcttagtagacagagacttccctttgaccaagat
ttgatgacccatcctactgacttggcactgattcctagaagttatatggctcattccttg
actatccaggaaaagaacatgacccagatgaactctgaaggggagatggtcaaggagcaa
gccccagatccagaaaagatatgtgcagacaaaagctttctgagtactaccatgccggat
aagtccagtaacataaattcaattctggaattgttccctaagttactaagcctggatgga
caggaatcacgtaaaccaactctctgtggccctgaagatcataagaccttaccaacttgc
aagggaagtttttttggatcagagtccataaagacaatggtcctacagttcctgcagcag
tattttttcatctatgacaatggagatcggcagggactcctccatacttaccatgctgag
gcttgcttctcattaaccgtccctttcagttctgtcgacttatgcacgagcagcttgtgt
gagtacttcaagtacagcagaaatatgaagattctcaaggatcctttggatggcagctct
caagggtgcgttcatgccttcactcggattttcattgctacctgtggcaacagttcagac
ctttgtatcatcaatgacaagctgtctgtgaggaatgcccatggggttcctagtgcctcc
acctctgtggtcacatcttcctccagttatttgccttccttctctcaagatctatgggag
atggtgccaacattctctgcccagtctagagagaatgttgagaggtctcaaaaatgccct
caaggtgaccagaggaattacaacagagctatacaaagccttgctttgctcaaggtaaag
gacacggtcccagaggataagttcacacagacagatacaagatcccaagaatag

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