Mastomys coucha (southern multimammate mouse): 116094959
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Entry
116094959 CDS
T07224
Symbol
Nxf3
Name
(RefSeq) nuclear RNA export factor 3
KO
K14284
nuclear RNA export factor
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03008
Ribosome biogenesis in eukaryotes
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc05014
Amyotrophic lateral sclerosis
mcoc05164
Influenza A
mcoc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116094959 (Nxf3)
03015 mRNA surveillance pathway
116094959 (Nxf3)
03008 Ribosome biogenesis in eukaryotes
116094959 (Nxf3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
116094959 (Nxf3)
05168 Herpes simplex virus 1 infection
116094959 (Nxf3)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116094959 (Nxf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116094959 (Nxf3)
03009 Ribosome biogenesis [BR:
mcoc03009
]
116094959 (Nxf3)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116094959 (Nxf3)
mRNA cycle factors
Stress granule specific factors
116094959 (Nxf3)
Ribosome biogenesis [BR:
mcoc03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
116094959 (Nxf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
TAP_C
NTF2
Motif
Other DBs
NCBI-GeneID:
116094959
NCBI-ProteinID:
XP_031232271
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Position
X
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AA seq
557 aa
AA seq
DB search
MVTASHLPRSGSTLKYFNVFYTAHRFIFGSKTNPIQRRMRCQRIFRRSILNSTEHTGDTV
HTSSYKQQYGEPAMSNSLMHTRRYTPYGMPSRHQRVNLHKWNQMSVNMEGGSQPPERKIE
RDKQDDTSENWFKVTIPFGIQYDKKWLLNLFQSQCHIPFTPVQFHYEKMQAHFFVNNPNV
AFMLKAISDKIRDETDNKISVFISPCDEPPSVTELKLEKMDHKKPQSHRTPSVILQPTMK
QQCATSQRVLSRQRLPFDQDLMTHPTDLALIPRSYMAHSLTIQEKNMTQMNSEGEMVKEQ
APDPEKICADKSFLSTTMPDKSSNINSILELFPKLLSLDGQESRKPTLCGPEDHKTLPTC
KGSFFGSESIKTMVLQFLQQYFFIYDNGDRQGLLHTYHAEACFSLTVPFSSVDLCTSSLC
EYFKYSRNMKILKDPLDGSSQGCVHAFTRIFIATCGNSSDLCIINDKLSVRNAHGVPSAS
TSVVTSSSSYLPSFSQDLWEMVPTFSAQSRENVERSQKCPQGDQRNYNRAIQSLALLKVK
DTVPEDKFTQTDTRSQE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtcactgcctctcatctcccaagaagtggaagcacactgaaatattttaatgttttt
tacactgctcacagattcatttttggttccaaaactaaccccattcaaagaagaatgaga
tgccagcgtattttccgtaggagcattctcaactcgactgagcacactggtgatacagtg
catacttcatcttataagcagcaatatggagagccagcaatgagtaattctctcatgcat
acccgaagatacactccatatggcatgccatcccgtcatcagagagtcaatttacataaa
tggaaccaaatgagtgttaacatggaggggggctcacaacctccagagagaaaaatagag
agggacaaacaagatgatacttcagagaactggttcaaggtcacaattccctttggcata
caatatgataagaagtggctgctgaatttgtttcagagccagtgccacatccctttcact
ccggtgcagtttcactatgaaaagatgcaggcccatttttttgtcaacaatcccaacgtt
gcctttatgctgaaggctatcagtgacaagattcgagatgagactgataataagatatca
gtcttcatcagtccctgtgatgaacccccctcagtgacagagctcaagttagaaaagatg
gatcacaaaaagccgcagagtcacagaactccatctgtaattctgcagccgactatgaag
caacagtgtgctacttctcagcgagttcttagtagacagagacttccctttgaccaagat
ttgatgacccatcctactgacttggcactgattcctagaagttatatggctcattccttg
actatccaggaaaagaacatgacccagatgaactctgaaggggagatggtcaaggagcaa
gccccagatccagaaaagatatgtgcagacaaaagctttctgagtactaccatgccggat
aagtccagtaacataaattcaattctggaattgttccctaagttactaagcctggatgga
caggaatcacgtaaaccaactctctgtggccctgaagatcataagaccttaccaacttgc
aagggaagtttttttggatcagagtccataaagacaatggtcctacagttcctgcagcag
tattttttcatctatgacaatggagatcggcagggactcctccatacttaccatgctgag
gcttgcttctcattaaccgtccctttcagttctgtcgacttatgcacgagcagcttgtgt
gagtacttcaagtacagcagaaatatgaagattctcaaggatcctttggatggcagctct
caagggtgcgttcatgccttcactcggattttcattgctacctgtggcaacagttcagac
ctttgtatcatcaatgacaagctgtctgtgaggaatgcccatggggttcctagtgcctcc
acctctgtggtcacatcttcctccagttatttgccttccttctctcaagatctatgggag
atggtgccaacattctctgcccagtctagagagaatgttgagaggtctcaaaaatgccct
caaggtgaccagaggaattacaacagagctatacaaagccttgctttgctcaaggtaaag
gacacggtcccagaggataagttcacacagacagatacaagatcccaagaatag
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