Mastomys coucha (southern multimammate mouse): 116095083
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Entry
116095083 CDS
T07224
Symbol
Sox2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04390
Hippo signaling pathway
mcoc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
116095083 (Sox2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
116095083 (Sox2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116095083 (Sox2)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
116095083 (Sox2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116095083
NCBI-ProteinID:
XP_031232463
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MYNMMETELKPPGPQQASGGGGGGGNATAAATGGNQKNSPDRVKRPMNAFMVWSRGQRRK
MAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKT
LMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQEQL
GYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMALG
SMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMAQHY
QSGPVPGTAINGTLPLSHM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagacggagctgaagccgccgggcccgcagcaagcttcggggggc
ggcggcggaggaggcaacgccacggcggcggcgaccggcggcaaccagaagaacagcccg
gaccgcgtcaagaggcccatgaatgccttcatggtgtggtcccgggggcagcggcgtaag
atggcccaggagaaccccaagatgcacaactcggagatcagcaagcgcctgggcgccgag
tggaaacttttgtcggagaccgagaagcggccgttcatcgacgaggccaagaggctgcgc
gctctgcacatgaaggagcacccggattataaataccggccgcggcggaaaaccaagacg
ctcatgaagaaggataagtacacgcttcccggaggcttgctggcccccggcgggaacagc
atggcgagcggggttggggtgggtgccggcctgggtgcgggcgtgaaccagcgcatggac
agctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggagcagctg
ggctacccacagcacccgggcctcaacgctcacggcgcggcgcagatgcagccgatgcac
cgctacgacgtcagcgccctgcagtacaactccatgaccagctcgcagacctacatgaac
ggctcgcccacctacagcatgtcctactcgcagcagggcacccccggtatggcgctgggc
tccatgggctctgtggtcaagtccgaggccagctccagcccccccgtggttacctcttcc
tcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtacctc
cccggcgccgaggtgccggagcccgctgcgcccagtagactgcacatggcccagcactac
cagagcggcccggtgcccggcaccgccattaacggcacactgcccctgtcgcacatgtga
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