Mastomys coucha (southern multimammate mouse): 116095149
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Entry
116095149 CDS
T07224
Symbol
Pabpc4l
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03015
mRNA surveillance pathway
mcoc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116095149 (Pabpc4l)
09123 Folding, sorting and degradation
03018 RNA degradation
116095149 (Pabpc4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116095149 (Pabpc4l)
03041 Spliceosome [BR:
mcoc03041
]
116095149 (Pabpc4l)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116095149 (Pabpc4l)
mRNA cycle factors
Stress granule specific factors
116095149 (Pabpc4l)
Spliceosome [BR:
mcoc03041
]
Complex C
Other components
Complex C specific factors
116095149 (Pabpc4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
RRM_7
RRM_Nup35
RRM_occluded
RRM_10
RRM_MARF1
RRM_3
Taeniidae_ag
RB_A
Motif
Other DBs
NCBI-GeneID:
116095149
NCBI-ProteinID:
XP_031232579
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MSLEAKYRAASLYVGDLHEDVTEDVLFRKFSTVGPVLSIRICRDLISQRSLGYAYVNFLQ
VNDAQKALDTMNFDVINGKSIRLMWSQPDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSP
FGMIMSSKVMTDEEGSKGYGFVHYQDQRAADRAIEEMNGKLLRESTLFVARFKSRKDREA
ELRDKPTFFTNVYIKNFGDDIDDEKLREVFSKYGHTLSVKVMKDATGKSKGFGFVSFDSH
EAAKNAVEDMNGQDINGQTVFVGRAQKKVERQAELKEMFEQMKQERIRARQAAKLYIKNL
DDTIDDETLRKEFSAFGSICRVKVMQEAGQSKGFGLICFFSPEAAAKAMAEMNGRILGSK
PLNIALGQKH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggaagctaagtaccgtgcagcttccctgtatgtaggcgacctccacgaagat
gtcacggaggacgtgctgttcaggaagttcagcacagtgggaccggtgttgtccatccga
atctgccgggacctgatttcccaacgttcactaggctatgcctatgtgaattttctgcag
gtgaatgatgctcagaaggccctagacaccatgaactttgatgtgatcaacggtaaatct
atccgtctcatgtggtctcaaccggatgcttgcctgagaaaatcgggaattgggaatgtg
tttatcaagaatctggacaaatccattgataacaaaaccttgtatgaacacttctcacct
tttggaatgatcatgtcctccaaggtgatgactgatgaagaaggctccaagggctatggc
ttcgtgcactaccaggaccagagagcagcggacagggccattgaggagatgaatgggaag
ctgctgagggagagcacattgttcgtggccagattcaaaagccgtaaggatcgggaggct
gagctcagagacaaacccacctttttcactaatgtatatatcaaaaactttggagatgac
atagatgatgagaagctcagggaagttttcagcaaatatggccatactttgagtgttaag
gtgatgaaagatgccactgggaagtccaaaggctttggatttgtgagttttgatagccat
gaggctgcgaaaaacgcagttgaagacatgaacggacaggacataaacgggcagacggtt
tttgtaggcagagcccagaagaaggtagaacggcaggctgagttaaaggaaatgtttgag
cagatgaaacaggaaaggatccgtgcacgtcaggcagctaagctctacattaagaacctg
gatgacaccattgatgatgaaacactgcgcaaggagttttctgcttttgggtccatttgc
agagttaaagtgatgcaggaagcagggcagagcaaaggctttggcttgatctgcttcttc
tctccggaggcagcagctaaagcaatggctgagatgaacggccgcatccttggctccaaa
cccctcaacattgcactgggtcagaagcactga
DBGET
integrated database retrieval system
