Mastomys coucha (southern multimammate mouse): 116095955
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Entry
116095955 CDS
T07224
Symbol
Ncbp1
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
mcoc03040
Spliceosome
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116095955 (Ncbp1)
09122 Translation
03013 Nucleocytoplasmic transport
116095955 (Ncbp1)
03015 mRNA surveillance pathway
116095955 (Ncbp1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116095955 (Ncbp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116095955 (Ncbp1)
03041 Spliceosome [BR:
mcoc03041
]
116095955 (Ncbp1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
116095955 (Ncbp1)
Spliceosome [BR:
mcoc03041
]
Common components
Common spliceosomal components
Cap binding complex
116095955 (Ncbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
DUF1690
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
116095955
NCBI-ProteinID:
XP_031233161
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSRRRHSYENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFSSTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSYWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMSTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDLESPKPKFVREVLEKCMRLSYHQHILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLSVAFKSKATNDEIFSILKDVPNPNQVEDDDEGFRFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDKGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSILTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggcggcacagctacgagaacgatggtggacaacctcacaaaaggaggaag
acgtctgatgcaaatgaaactgaagatcatttggaatctttaatatgcaaagtaggagaa
aagagtgcctgctctttagagagcaatctcgaaggcctggccggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggctcctttgtacagttgcacgtctgttacct
gagaagctaacaatttatacaacattagttggactgctgaatgccagaaactacaacttt
ggaggagaatttgttgaagctatgattcgtcaacttaaagaatcactaaaagcaaataac
tataatgaagctgtatatttggtccgttttctgtccgatcttgtgaattgtcatgtgatt
gctgccccatctatggttgctatgtttgagaattttgtaagtgtaactcaagaagaagat
gtgcctcaagtgcgacgggattggtatgtgtatgcatttctgtcgtccttgccctgggtt
ggaaaggagttgtatgaaaagaaagatgcagaaatggaccggatcttctccagcactgaa
agctatctcaaaagacgccagaagactcatgtgcccatgttacaagtatggactgccgac
aaaccacatccacaagaagagtatttagattgcctgtgggcccagattcagaaattaaaa
aaagaccggtggcaggaaaggcacatcctaagaccctacctcgccttcgacagcatcctc
tgtgaagcactgcagcacaacctgcctcccttcacaccgccacctcacacggaggactcc
gtgtacccgatgcccagggtcatcttcaggatgtttgactacacagatgacccagagggt
cccgttatgccagggagccattcggtagagaggtttgtcatagaggagaatcttcattgc
atcataaaatcctactggaaggaaaggaaaacttgcgctgcacagctagtgagctatccg
gggaagaacaagatccccttgaactaccacatagtggaggtgatctttgcagagctgttt
cagcttccagcgcctcctcacattgacgtgatgtacactacactgctaatcgagctatgc
aaacttcagccgggctctctgccccaagtgcttgcacaggcgactgagatgctatatatg
cgtctggacacgatgagtaccacgtgtgtagacaggtttattaattggttttctcatcat
ctaagtaattttcaattccgttggagctgggaagattggtcagattgtcttactcaggat
cttgaaagtcccaaaccaaagtttgtaagagaagttctagagaagtgtatgaggttgtct
taccatcaacatatattagatattgttcctcccaccttctcagctctgtgtcctgcaaac
ccaacctgcatttacaagtatggagatgaaagtagcaattctcttcctggacattccgtg
gcactctgtttatctgttgcttttaaaagtaaggcaaccaacgatgagatcttcagcatt
ctgaaggacgtaccaaaccctaaccaggttgaggatgacgatgaagggttcagatttaac
cccttgaaaatagaggtctttgtccagactctactgcacctagctgccaagtccttcagt
cactccttcagtgctcttgcaaagtttcatgaagtcttcaaaactctagcagaaagtgat
aaggggaagctacatgtgctgagagttatgtttgaagtttggaggaatcatccacagatg
attgctgtactggttgataagatgattcgtacacaaattgttgactgcgctgcagtagca
aactggatcttctcatcggagctgtctcgtgactttacgaggttgtttgtgtgggaaatt
ttgcactctacaattcgtaagatgaacaaacatgttctgaagatccagaaagagctagaa
gaagctaaagagaaactggcaaggcagcacaaacgacgcagtgatgatgatgacaggagc
agtgacaggaaggacggtgccctcgaagagcaaatagaaaggctgcaggagaaggtggag
tcagctcagagcgagcagaagaaccttttcctcgtcatcttccagcgtttcatcatgatc
ttgactgagcacttggtacgatgtgaaactgatgggaccagtatattgaccccgtggtat
aagaactgcatagagaggctgcagcagatcttcctacagcatcaccagataatccagcag
tacatggtgaccctggaaaacctgctcttcacggccgagttagatcctcacatcctggct
gtgttccagcagttctgtgctttgcaggcctaa
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integrated database retrieval system
