Mastomys coucha (southern multimammate mouse): 116096021
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Entry
116096021 CDS
T07224
Symbol
Slc44a1
Name
(RefSeq) choline transporter-like protein 1 isoform X1
KO
K06515
solute carrier family 44 (choline transporter-like protein), member 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
116096021 (Slc44a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116096021 (Slc44a1)
04090 CD molecules [BR:
mcoc04090
]
116096021 (Slc44a1)
Transporters [BR:
mcoc02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
116096021 (Slc44a1)
CD molecules [BR:
mcoc04090
]
Proteins
116096021 (Slc44a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Motif
Other DBs
NCBI-GeneID:
116096021
NCBI-ProteinID:
XP_031233273
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MRFGGTSHPYLQTQEVSSKREWKPLEDRSCTDIPWLLLFVLFCIGMGFICGFSVATGAAA
RLVSGYDSYGNICGQRNAKLEAIPNSGLDHTHRKYVFFLDPCNLDLINRRIKSIALCVAA
CPRQELRTLSDVQKFAEINGSALCSYNIRPSEYTLTSKSSGFCPKLPVPASAPIPFFHRC
APVNISCYAKFAEALITFVSDNSVLHRLISGVMTSKEIILGLCLLSLVLSMILMVIIRYI
SRVLVWILTILVILGSLGGTGVLWWLYAKQRRSPKETVIPEQLQIAEDNLRALLIYAISA
TVFTVILFLIMLVMRKRVALTIALFHVAGKVFIHLPLLVFQPFWTFFALVLFWAYWIMTL
LFLGTTGSAVQNEQGFVEYKISGPLQYMWWYHVVGLIWISEFILACQQMTVAGAVVTYYF
TRDKRNLPFTPILASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYIHSQLKGKENACAR
CMLKSCICCLWCLEKCLSYLNQNAYTATAINSTNFCTSAKDAFVILVENALRVAAINTVG
DFMLFLGKVLIVCSTGLAGIMLLNYQQDYTVWVLPLIIVCLFAFLVAHCFLSIYEMVVDV
LFLCFAIDTKYNDGSPGREFYMDKVLMEFVENSRKAMKEAGKGGAADARELKPMVGGDEE
AAALHDFPCHFFSVCVLTDCTSSGEAFVVCITQDMLLFLFACLPITWMAEALSQLRLPSV
KVS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttggaggaacaagccatccatacttgcagacccaggaagtgagctccaaacga
gaatggaaaccattggaggaccgtagctgcacagacataccatggctactgctctttgtt
ctcttctgcattgggatgggatttatttgtggcttttcagtagcaacaggtgcagcagca
agactagtgtcaggatacgacagctatggaaatatctgtgggcaaagaaatgcaaaactg
gaagcaatacccaacagtggtctggaccacacccaccggaagtatgtgttctttttggac
ccatgcaatctggacttgataaacaggaggatcaagtctatagcactgtgtgtagcggcg
tgtccccgacaggagctgagaaccttgagtgacgtccagaagtttgcagagatcaatggc
tcagcactatgtagctacaacataaggccctctgagtacacgctgacttcaaagtcctct
ggcttttgccccaaactaccagtaccagccagtgcacctattccattcttccatcgctgt
gctcctgtgaacatttcctgctatgccaagtttgcagaggccctgatcacctttgtcagt
gacaatagtgtcttacacaggctgattagtggagtaatgaccagcaaagaaattatattg
ggactttgcttgttatcactagttctgtccatgattctgatggtgattatcaggtatata
tcaagagtgctagtgtggatcctcacaattctcgttatactgggttcacttggtggcacg
ggtgtactgtggtggctatatgcaaagcaaagaaggtctcccaaagaaacggttattcct
gaacagcttcagatagctgaggacaatctgcgggcgctcctcatctatgccatttcagct
acggtgttcactgtcattcttttcctgatcatgctggttatgcgcaagcgggtcgctctc
accatcgccttgttccatgtggctggcaaggtcttcatacacttgcctctgttagtcttc
cagcccttctggacgttttttgctctcgtcttattttgggcatactggataatgacactc
cttttccttggcactactgggagcgctgtgcagaatgagcaaggtttcgtggagtacaaa
atttctgggcctttgcagtacatgtggtggtaccacgtggttggcctgatttggatcagt
gagttcatcctcgcctgtcagcagatgactgtggcaggagctgtggtaacatactacttt
actagggataaacggaatttgcctttcacacctattctggcatcagtgaatcgccttatt
cgttaccacctcggtaccgtggcaaaaggatccttcattatcacccttgtcaaaatcccc
aggatgatccttatgtatatccacagtcagctcaaagggaaggaaaatgcttgcgcacga
tgcatgctgaaatcctgcatttgctgcctttggtgtcttgaaaagtgcctgagctactta
aaccagaatgcatacacagccacagctatcaacagcaccaacttctgcacctcagcgaag
gatgccttcgtcattctggtggagaatgctctgcgagtggccgccatcaacacagtgggg
gacttcatgttattcctaggcaaggtgctgatagtctgcagcactggtttggctgggatt
atgctgctcaactaccagcaagattacacagtatgggtgctgcctctgatcatcgtctgc
ctctttgctttcctagtcgctcattgcttcctgtccatttacgaaatggtagtggatgta
ttgttcttgtgttttgccattgatacaaaatacaatgatgggagccctggacgagaattc
tatatggacaaagtgctgatggagtttgtggaaaacagtaggaaagcaatgaaagaagct
gggaagggaggcgccgcggacgcccgagagctaaagccgatggtaggtggcgatgaggag
gcagccgccctccacgactttccctgtcacttcttctctgtctgtgtcctcactgactgc
acgtcctctggagaagcgtttgttgtctgtatcacgcaggacatgctgctctttctgttt
gcctgcttacccatcacttggatggcagaggccctgtcacagctgagactaccatctgtg
aaagtgagctga
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integrated database retrieval system
