Mastomys coucha (southern multimammate mouse): 116096134
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Entry
116096134 CDS
T07224
Symbol
Tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04151
PI3K-Akt signaling pathway
mcoc04510
Focal adhesion
mcoc04512
ECM-receptor interaction
mcoc05165
Human papillomavirus infection
mcoc05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
116096134 (Tnc)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116096134 (Tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116096134 (Tnc)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
116096134 (Tnc)
09172 Infectious disease: viral
05165 Human papillomavirus infection
116096134 (Tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcoc00536
]
116096134 (Tnc)
Glycosaminoglycan binding proteins [BR:
mcoc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116096134 (Tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_2nd
EGF
NDNF
DUF4998
Interfer-bind
fn3_2
hEGF
FN3_Tor_3rd
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
116096134
NCBI-ProteinID:
XP_031233511
LinkDB
All DBs
Position
Unknown
AA seq
2110 aa
AA seq
DB search
MGAMTWLLPGIFLALFALTPEGGVLKKVIRQKRESGLNMTLPEENQPVVFNHIYNIKLPM
GSQCSVDLESASGEKDLTPTPESSGSFQEHTVDGENQIVFTHRINIPRRACGCAAAPDVK
ELLSRLEELELLVSSLREQCTMGTGCCLQPAEGRLDTRPFCSGRGNFSAEGCGCVCEPGW
KGPNCSEPECPGNCNLRGQCLDGQCICDEGFTGENCSQLACPNDCNDQGRCVNGVCVCFE
GYAGLDCGLEVCPVPCSEEHGMCVDGRCVCKDGFAGDDCNEPLCLNNCYNRGRCVENECV
CNEGFTGEDCSELICPNDCFDRGRCVNGTCYCEEGFTGEDCGELTCPNDCQGRGQCEEGQ
CVCNEGFAGADCSEKRCPADCHHRGRCLNGQCECDDGFTGADCGDLQCPNGCSGHGRCVN
GQCVCDEGYTGEDCSQRRCPNDCHNRGLCVQGKCVCEQGFKGFDCSEMSCPNDCNQHGRC
VNGMCICDDDYTGEDCRDRRCPRDCSQRGRCVDGQCICEDGFTGPDCAELSCPSDCHGHG
RCVNGQCICHEGFTGKDCQEQRCPSDCHGQGRCEDGQCICHEGFTGLDCGQRSCPNDCSN
QGQCVSGRCICNEGYTGVDCSEVSPPKDLIVTEVTEETVNLAWDNEMRVTEYLIMYTPTH
ADGLEMQFRVPGDQTSTTIRELEPGVEYFIRVFAILENKRSIPVSARVATYLPAPEGLKF
KSIKETSVEVEWDPLDIAFETWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYE
ISLHIVKNNTRGPGLKKVTTTRLDAPSHIEVKDVTDTTALITWFKPLAEIDSIELSYGIK
DVPGDRTTIDLTHEDNQYSIGNLRPDTEYEVSLISRRVDMASNPAKETFITGLDAPRNLR
RVSQTDNSITLEWRNVKADINSYRIKYAPISGGDHAEIDVPKSQQATTKTTLTGLRPGTE
YGVGVSAVKGDKESDPATINAATEIDAPRDLEVSETTQDSLTLFWKTPLAKFDRYRLNYS
LPTGQSMEVQLPKDATSHVLTDLEPGQEYTILLTAEKGRHKSKPSSVKASTEEMLPLENL
TVTEVGWDGLRLNWTADDLAYEYFVIQVQEANKVETAHNFTVLGNLRAADIPGLKAATPY
RVSIYGVARGYRTPVLSAETSTGKTPNLGEVTVAEVGWDALKLNWTAPEGAYKNFFIQVL
EADTTQIVLNLTVPGGLRSVDLPGLTAATRYYITLQGVTQDFSTAPLSVEVLTEALPQLG
GLSVTEVSWDGLTLNWTTDDLAFKHFVIQVQEANNVEATQNLTVPGSLRAVDIPGLKADT
PYRVSIYGVIQGYTTPMLSADVSTAKEPEIGNLNVSDVTPESFNLSWTATDGIFDMFTIE
IIDSNRLLQTAEHNISGAERTAHISGLPPSTDFIVYLSGIAPSIRTKTISTTATTEALPL
LENLTISDTSPYGFTVSWTASENAFDSFLVTVVDSGKLLDPQEFTLSGTQRKLELRGLIT
GIGYEVLVSGFTQGHQTKPLRAETITEAEPEVDNLLVSDATPDGFRLSWTADEGIFDNFV
IRIRDTKKHSEPQEITLPSPERTRDITGLREATEYEIELYGISRGRRSQPVSAIATTAMG
SPKEIMFSDITENAATVSWRAPTAQVESFRITYVPVTGGTPSMVTVDGTDTETRLVKLTP
GVEYHVSVIAMKGFEESDPVSGSLITALDGPSGLLIANITDSEALAMWQPAIATVDRYVI
SYTGERVPEVTRTVSGNTVESELHDLEPATEYILSVFAEKGQQKSSTIATKFTTDLDSPR
ELTATEVQSETALLTWRPPRASVTGYLLVYESVDGIVKEVIVGPDTTSYSLADLSPSTHY
TARIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQAMLNGDTTSGLYTIYINGDKTQALE
VYCDMTSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITSQGQYE
LRVDLQDHGESAYAVYDRFSVGDAKSRYKLKVEGYSGTAGDSMNYHNGRSFSTYDKDTDS
AITNCALSYKGAFWYKNCHRVNLMGRYGDNNHSQGVNWFHWKGHEYSIQFAEMKLRPSNF
RNLEGRRKRA
NT seq
6333 nt
NT seq
+upstream
nt +downstream
nt
atgggggccatgacctggctattgccaggcatctttctagctttgtttgccctcactcct
gaaggtggggtcctcaagaaagtcatcaggcagaagcgagagagtgggctgaacatgacc
ctgccagaagaaaatcagccagtagtattcaaccatatctacaacatcaagttgcccatg
ggttctcaatgctcagtggatctggagtcagcgagtggggagaaagacctgacccccacg
ccagagtccagtggaagcttccaggaacatacagtggatggggagaaccagattgtgttc
acacaccgcatcaacatccctcgccgggcctgtggctgtgctgcagctccagatgtaaag
gagctcctgagcaggctagaggagctggagttgctggtatcttctctaagggagcagtgc
accatgggtacaggctgttgcctccaacctgcagaaggccgtctggacaccaggcccttc
tgcagcggccggggcaacttcagtgccgaaggctgtggctgtgtctgtgaaccgggctgg
aaaggccccaactgctctgagccggaatgtcctgggaactgcaatctcagaggccagtgc
cttgatggccagtgtatctgtgacgagggtttcactggggaaaactgcagccagctggcc
tgtcccaatgactgcaatgaccagggcaggtgtgtgaacggggtctgtgtgtgcttcgaa
ggctatgccggccttgactgtggcctggaagtctgcccagtgccctgcagcgaggaacac
gggatgtgtgtggatggcaggtgtgtgtgcaaagatggctttgcaggcgacgactgcaac
gagcccctttgcctcaacaactgctacaaccgtgggcggtgtgtggagaatgagtgtgtc
tgcaatgagggcttcactggcgaggactgcagtgagctcatttgccccaatgactgcttt
gaccgaggtcgctgcgtcaacggcacctgctactgcgaggaaggtttcacaggcgaagac
tgtggtgagctcacctgccccaacgactgtcagggccgtggccagtgtgaggagggacag
tgtgtttgcaatgaaggctttgcaggagcagactgcagtgaaaagcggtgtcctgccgat
tgtcaccaccgtggccgctgcctcaacgggcagtgtgagtgtgatgatgggttcacaggg
gccgactgtggggatctccagtgtcccaatggctgcagtgggcacggtcgctgtgtcaat
gggcaatgcgtgtgtgacgagggctacactggagaagactgtagccagcggcgatgcccc
aatgactgccacaaccgaggtctctgcgtacagggcaaatgcgtctgtgaacaaggcttc
aagggctttgactgtagtgagatgagctgtcccaatgactgcaaccagcatggccgttgt
gtgaacggcatgtgcatctgtgatgatgactacactggggaagattgcagagaccggcgc
tgtccccgggactgtagccaacgggggcgctgtgtagacggacagtgcatttgtgaggat
ggcttcactggccctgactgtgctgagctctcctgccccagtgactgccacggccatggc
cgctgtgtgaatggccaatgcatctgccatgagggcttcactggcaaagactgccaagag
caaaggtgccccagtgactgccacggacaaggccgctgtgaggacggccagtgtatctgc
catgaaggcttcacaggcctggactgtgggcagcgctcctgtcccaatgactgcagcaac
cagggacaatgtgtgtcaggccgctgcatctgcaatgaaggctacacaggtgtagactgc
tctgaagtgtcccctccaaaagaccttattgtgacagaagtgacagaggagactgtaaat
ctggcatgggacaatgagatgcgggtcactgagtacctcattatgtacacacccacccat
gctgatggcctggagatgcagttccgtgtgcctggggaccagacatccaccaccatccgg
gagctggagccaggagtggagtacttcattcgtgtgtttgccatcctagagaacaagagg
agcatccctgtcagtgccagggttgccacctacttgcctgcacctgaaggtctaaaattc
aagtctatcaaggagacatctgtggaagtagaatgggatcctctagacattgctttcgaa
acatgggagatcatcttccgaaatatgaacaaagaagatgagggagagatcacaaaaagc
ctgaggaggccagaaacttcctaccgccaaactggccttgctcctggccaagaatatgaa
atatctctgcacattgtgaaaaacaacacccgaggccctggcttgaaaaaagtgaccaca
acccgcctggatgcccccagccacattgaggtgaaagatgtcacggacaccacagcgctg
atcacctggttcaagcccttggctgaaattgatagcattgagctctcctatggcatcaag
gatgtgcctggagaccgtaccaccatcgacctcacacatgaagataaccaatactccatc
gggaacctgagacctgacacggagtatgaggtgtccctcatctcccgcagagtggacatg
gcaagcaaccctgccaaagagaccttcatcacaggattggatgcccccaggaatctccgc
cgtgtctcacagacagacaacagcatcaccttggagtggaggaatgtcaaggcagacatc
aacagttacagaattaagtatgcacctatctctggaggtgaccacgctgagatagatgtt
ccaaagagccagcaagccacaaccaaaactacactcacaggtctaaggccaggaactgaa
tatggggttggtgtttctgctgttaagggagacaaggagagcgatccagcgaccatcaat
gcggccacagaaattgatgcacccagggacttagaggtgtctgaaaccacacaagacagt
ctgactttattctggaagactcccctggccaagtttgatcgttaccgcctcaactacagc
ctccccacaggccagtcaatggaagtccagctgccaaaggatgccacctcccatgtcctg
acagacctggagccagggcaagaatacaccatccttctcactgccgagaagggtagacat
aagagcaagccttcgagtgtgaaggcatccacagaagaaatgcttcccctggaaaatctc
accgtgactgaggtcggctgggatggcctcagactcaactggactgcagatgacctggcc
tatgagtactttgtcattcaggtacaggaagccaacaaggtggagactgctcacaacttc
acagtacttggtaacctccgggctgcagacatcccaggcctcaaagctgccactccttat
agagtctccatctacggggtggcccggggctatagaacaccagtgctctctgctgagacc
tccacagggaaaactcccaatttgggagaagtcactgtggccgaggtgggctgggatgcc
ctcaagctcaactggactgctccagaaggagcctataagaactttttcattcaggtgcta
gaggctgacacgacccagattgtcctgaacctcacagtcccaggaggactgaggtcagtg
gacctgcctgggctcacagcagccacccgctattacatcacccttcaaggggtcacccag
gacttcagcacggcccctctctctgttgaggtcttgacagaggcgctccctcagctggga
ggcttgtccgtgactgaggtcagctgggatggcctgacactcaactggaccacagatgat
ctggcctttaagcactttgtcattcaggtgcaggaggccaacaatgtggaggccactcag
aacctcactgtgcccggcagcctcagagctgtagacatcccaggcctcaaggctgacact
ccttatagagtctccatctatggggtgatccaaggctataccacaccaatgctctctgct
gacgtctctacagccaaagaacctgaaattggaaacttaaatgtttctgatgtaactccc
gagagcttcaatctctcctggacagctacggatgggatcttcgacatgtttactatcgaa
attattgattctaataggttgctgcagacagcagaacataatatatctggtgctgaacga
actgcccacatctcagggcttccacctagtactgattttattgtctacctctctggaatt
gctcccagcatccgtaccaaaaccatcagtaccacagccaccacagaggccttgcccctt
ctggaaaatttaaccatttccgacactagtccctacgggttcacagtttcctggacggca
tcggagaatgcctttgacagctttctagtaacggtggtggattctgggaagctgctggac
ccccaggaattcacactttcaggaacccagaggaagctggagcttagaggcctcataact
ggcattggctatgaggtcctggtctctggcttcacccaagggcaccaaacaaagcccttg
agggctgagaccatcacagaagccgaaccggaagttgacaaccttctagtttcagatgcc
actccagacggtttccgtctgtcctggactgctgatgaagggatattcgacaattttgtt
atcagaatcagagataccaaaaagcattctgaaccacaagaaataaccctcccttccccc
gaacgtaccagggacataacaggtctcagagaggccacagaatacgaaattgaactctat
ggaataagccgtggaaggcgatcccagccagtcagtgccatagcaacaacagccatgggt
tctccgaaggaaatcatgttctcagacatcactgaaaatgcagcgacagtcagctggagg
gcacccactgctcaggtggagagtttccggattacctatgtgcctgtgacaggaggtacc
ccgtccatggtgaccgtggatggaacagatactgagacccgcctggtgaagctcacccct
ggggtggagtaccacgtcagtgtgattgccatgaagggattcgaagaaagcgatccggtc
tcgggatctctaatcacagctctggatggtccatctggccttctgatagccaacatcaca
gactcagaagccttggccatgtggcagccagccattgccactgtggaccgttatgtcatc
tcctacacgggggagagagtgccagaagttacacgcacagtgtctgggaatacagtggag
tctgagctacatgacctggagcctgccacagagtacatactgagcgtctttgcagagaaa
ggccagcagaagagctctaccatcgctaccaagtttaccacagacctcgattccccaaga
gaactgactgctactgaggttcagtcagaaactgccctcctcacctggagacctccccga
gcatcagtcactggatacctcctggtctacgaatctgtggatggtatagtcaaggaagtc
attgtggggcctgacaccacctcctacagcctggcagacctgagcccatccacccactac
acagcaaggatccaggcattgagtgggtccctgaggagcaagctgatccaaaccatcttt
accacaattggactcctgtacccattccccagggactgctctcaagcaatgttgaatggc
gataccacctctggtctctacaccatctatataaatggtgacaagacccaagcactggaa
gtctactgtgatatgacctctgatggaggtggatggattgttttcctgagacgcaaaaat
ggacgtgaggacttttaccgaaactggaaggcctatgccgctgggtttggagaccgcaga
gaagaattctggcttggactcgataacctgagcaaaatcacatcccaagggcagtatgag
ctccgggtggacctacaagaccatggggagtcggcttatgctgtgtatgacaggttcagt
gttggagatgccaagagtcgctacaagctgaaggtagaaggatacagtggaacagcaggt
gactccatgaactatcacaatggtagatccttctctacctatgacaaggacacagactcg
gccatcaccaactgtgccttgtcctacaaaggagccttctggtataagaactgtcatcgt
gtcaacctgatgggcagatatggggacaataaccacagtcagggtgttaactggttccat
tggaaggggcacgagtactcaatccagtttgctgagatgaaactgagacccagcaacttc
cggaatctggaaggcaggcgtaagcgggcgtaa
DBGET
integrated database retrieval system
