Mastomys coucha (southern multimammate mouse): 116096491
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Entry
116096491 CDS
T07224
Name
(RefSeq) ATP-dependent RNA helicase DDX3Y
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04622
RIG-I-like receptor signaling pathway
mcoc05161
Hepatitis B
mcoc05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
116096491
09172 Infectious disease: viral
05161 Hepatitis B
116096491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116096491
03041 Spliceosome [BR:
mcoc03041
]
116096491
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116096491
Enzymes [BR:
mcoc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116096491
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
116096491
mRNA cycle factors
Common to processing body (P body) and stress granule
116096491
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
116096491
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
116096491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Utp25_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116096491
NCBI-ProteinID:
XP_031234195
LinkDB
All DBs
Position
Y
Genome browser
AA seq
572 aa
AA seq
DB search
MSQVAAENTVSLDQQFAGLDLNSSDNQNGGGSTESKGRYIPPHLRNRETSKGVCDKDNSA
WSYGKDKDAYSSFGSRDSRGKPNYFSDHGSGSRGRFDDHGRSDYDGICGRDRTGFGKFER
SGHSRWGDKLDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIEN
FSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQ
IYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVY
GGADTVQQILDEYIFLAVGRVGSTSENITQKVVWVEELDKRSFLLDLLNATGKDSLTLVF
VETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDI
SNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEV
PSWLESMAYEHHYKGSSRGRSKSRFSGGFGARDYRQSSGSANAGFNSNRTNSSRSSGSSH
NRGFGGGGYGGFYSNDGYGGNYNSQAVDWWGN
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaagtggcagcggaaaatacggtcagcttggaccagcaatttgctggtcttgac
ctgaactcatcagataatcagaatggaggaggaagtacagagagcaaagggcgctatata
cctcctcacttaaggaacagagaaacatctaaaggtgtctgtgataaggacaattcagca
tggagttatggtaaagataaagatgcctacagcagttttggatcccgtgattccagggga
aagcccaactatttcagtgatcatggaagtggatccaggggaaggtttgatgatcatggt
cgaagtgactatgacggtatttgcggtcgtgaccgaactggatttggcaaatttgaacgg
agtggtcatagtcgttggggtgacaaattagatgaagatgattggtcaaaaccacttcca
ccaagtgaacgcttagagcaagaacttttttctggaggaaacacagggattaactttgag
aaatatgatgatataccagtagaggcaactggaaataattgccctcctcacattgaaaat
ttcagtgatattgagatgggagaaattatcatggggaacattgaacttactcgttacact
cgtcctactccagtgcaaaaacatgctattccaattattaaagaaaaaagggacttaatg
gcttgtgctcaaacagggtctggaaaaactgctgcatttctactacccattctcagtcag
atttatacagatggtccaggagaggctttgaaggctatgaaggaaaatggaagatatggt
cgacgtaaacaatacccaatctccttggtgttagccccaacaagagaattggctgtgcag
atctatgaggaagccagaaaattttcataccggtctagagtccgtccatgtgtagtgtat
ggtggtgctgatactgttcagcagattttagatgaatatatctttctggctgtaggcaga
gtaggctctacttctgagaacatcacacaaaaagtagtatgggttgaagagctagacaaa
cggtcatttttacttgatctcttaaatgcaacagggaaggattcattgactttagtattt
gtggagactaaaaagggtgcagattcactggagaacttcttatttcaagaaagatatgcc
tgtactagtattcatggagacagatcacagaaagatcgagaggaggcccttcaccagttc
cgctcagggagaaagccaattttagtggctacagctgtggcagcaagaggtctagacatt
tcaaatgtgaaacatgttatcaattttgatttgccaagtgatattgaagaatatgtgcat
cgtattggccgcacaggacgtgtaggaaaccttggacttgccacgtcttttttcaatgag
aggaatttgaacatcacaaaagatttgttagatctccttgttgaggctaaacaagaagta
ccatcttggttggaaagtatggcttatgaacaccactacaagggaagcagccgtggacgt
tctaaaagcagattcagtggaggatttggtgccagagactatcgacagagcagtggttct
gcaaatgctgggtttaatagtaaccgtaccaatagcagccgaagtagtggtagtagccac
aacagaggatttggtggaggtggctatggaggtttctacagtaatgatggatatggagga
aattataactcccaggcagttgactggtggggcaattga
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