KEGG   Mastomys coucha (southern multimammate mouse): 116096519
Entry
116096519         CDS       T07224                                 
Name
(RefSeq) lysine-specific demethylase 5D isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mcoc01009]
    116096519
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116096519
Enzymes [BR:mcoc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116096519
Protein phosphatases and associated proteins [BR:mcoc01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116096519
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116096519
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD P2RX7_C PHD_ash2p_like
Other DBs
NCBI-GeneID: 116096519
NCBI-ProteinID: XP_031234279
LinkDB
Position
Y
AA seq 1549 aa
MKLGSDDFLPPPECPVFEPTWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWHPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERKILDLYSLNKIVM
EEGGYEAICKDRRWARVAQRLNYPSGKNIGSLLRSHYERIIYPYEMFQSGANLVQCNTDP
FDSEEKDKEYKPHSIPLRQSVQPSKFSCYNRRAKRLQPEPEPTEEDIEKNPELKKLQIYG
AGPKMIGLGLKAKEKTVRKKDSIQPDKEEVTCPATVVVKGEASGFGKATSAFSDKNLNHS
FESCTKMAMQLRNNHSSAQFMDSYICRICSRGDEDDRFLLCDGCNDNYHIFCLLPPLSEV
PKGVWRCPKCILAECQRPPEAFGFEQATQEYTLQSFGEMADSFKTDYFNMPVHMVPTEVV
EKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWNLSPEEKEYAASGWNLNVMPV
LDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLA
AEHLEDVMKRLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAY
HSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMAAFPEKLDLN
LAVAVHKEMFIMVQEERRLRKTLLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALAC
YDCPDSLVCLSHINDLCKCSRSRQYLRYRYTLDELPAMLQKLKIRAESFDNWANKVQAAL
EVEDGRKRSFEELRALESEARDRRFPNSELLQRLKKCLTEAEACISQVLGLISNSEDRSQ
TPQITLTELQILLKQMGTLPCTMHQIDEVKDVLQQVETYQIETREALTSLPYSLEILKSL
MEKGQQLRVEVPEAHQLEELLEQAQWLDQVKQALAPSGQRHSLVMMKKLLVMGTKVSSSP
SVNKARAELQELLTVAECWEEKAHFCLEASQKHSPATLEVIIREAENIPVYLPNIQSLKE
ALTKAQAWIADVNEIQNGDHYPCLDDLEGLVAVGRDLPVELEELRQLENQVLTAHSWKEK
ASKTFLKKNSCYTLLEVLCPCADAGSVSTKRSRWIEKEMGLYKYDTELLGLSAQDLRDPG
SVIMAFKEGEEKEKEGILHLRHINSAKPSPMSSSMNTSATSICVCGQVCAGVEALQCDLC
HDWFHGQCVTVPHLLSSLRANHTSSQLLAWWEWNTKFLCPLCMRSRRPRLETILSLLVGL
QRLSVRLPEGEALQCLTERAIGWQGRARQALASEDVTALLKQLAKSRQQLQDELRHEKPS
TLPSGLASDCITEDSGKDTLKEEEELVLNEDRLKSSEKIVPKESSCKRDEELLPSLLSQL
TGPVLELPEATRAPLEELMMEGDLLEVTLDENHSIWQLLQAGQNPNLERIHTLLELEKPE
NPGSSEQQIPERRRRRRQKVVLSRKGEDFIQKELESKRVRSSRIKPKEEKFQEPIHGDNV
LLTHRTEHTDILKDHMNSVQEKDPSPSSSFPSLTPLLHLSYFHQQKLQQ
NT seq 4650 nt   +upstreamnt  +downstreamnt
atgaagcttggatctgacgattttctaccgccgcctgagtgccctgtgtttgagcccact
tgggcggaattccgagatcctcttggttatatagctaaaatcagacccattgcggagaag
tcaggcatttgcaagatacgaccacctgcggattggcaccctccttttgctgtagaagtt
gataacttcagatttactcctcgaattcagaggctaaatgaactggaggcccagactaga
gtaaaactgaactatttggatcagattgcaaaattctgggaaattcagggttcttcctta
aagatacctaatgtggagaggaagatcttggatctttacagccttaataagattgtgatg
gaggaaggtggatatgaagcaatctgcaaggaccgccggtgggcccgtgttgcccaacgc
cttaattacccatcagggaaaaacattggttccctgctacggtcccactatgaacgcatc
atttacccttacgaaatgtttcagtctggagctaatcttgtgcagtgtaatacagatcca
tttgacagtgaagaaaaagacaaggaatacaaacctcatagcatccctcttagacagtct
gttcagccatcaaaattcagttgctacaatagacgagcaaaaaggctacagcctgagcca
gaacccacagaagaggacattgagaaaaacccagagctaaagaaactacagatatatggg
gcaggccccaagatgataggcttgggcctcaaggctaaggagaagactgtgagaaagaaa
gatagcatacaaccagataaagaagaagtgacatgccctgcaactgttgtagtgaagggg
gaagccagtgggtttggaaaagcgacatcagcattttctgacaagaacttaaatcacagt
tttgaatcttgtacgaagatggctatgcagctacggaacaatcacagcagtgcccagttt
atggattcatatatttgccgaatatgctctcgtggggatgaagatgataggtttctgctc
tgtgatggctgtaatgataattaccacatcttttgcctattgccacccctttctgaagtc
cccaagggagtatggaggtgcccaaagtgtattttagcggagtgccagcgtcctcctgaa
gcttttggctttgagcaagctacacaggaatatactttgcagagttttggtgagatggct
gattccttcaagactgactacttcaacatgcctgtacatatggtacctacagaagttgtg
gaaaaggaattctggaggctggtgagcagcattgaggaggatgtgacagttgagtatgga
gcagacattcactccaaagaatttggcagtggttttcctgtcaacaatagcaaatggaac
ttatcccctgaagaaaaggagtatgctgctagtggttggaatctcaatgtgatgccagtg
ctggaccagtctgttctttgccacatcaatgcagacatctcaggcatgaaagtgccctgg
ttgtatgtaggcatggtgttttcagcattttgttggcatattgaagatcactggagttat
tccattaactacctgcactggggtgaaccaaagacctggtatggagtaccttctctagca
gcagaacacttggaggatgttatgaagagacttacaccagagttgtttgacagccagcct
gacctcctgcatcaacttgttactctgatgaatcccaacactctcatgtcacatggagtg
ccagttgttcgtacaaaccagtgtgcaggggaatttgtcattacttttcctcgtgcttac
cacagtggctttaaccaaggttataactttgctgaggcagtgaacttttgcactgccgat
tggctacctgttggacgccagtgtattgaacactaccgccgactccggcgctattgtgtc
ttctcccatgaagagctcatctgcaagatggctgcattcccagagaagttggatctaaat
ctagcagtggcagttcacaaggagatgttcattatggttcaggaggagcgtcgcctacga
aagaccttgttggagaagggcatcacggaagctgagcgagaggcctttgagctactccca
gatgatgagcgtcaatgcatcaagtgtaagaccacgtgcttcctgtcagccttggcctgt
tatgactgtccagatagtcttgtctgcctttcccatatcaatgatctatgcaagtgctca
aggagccgacagtacttacggtataggtacacattggatgaactacctgctatgttacaa
aagctgaagattcgggctgagtcatttgacaactgggccaacaaagtacaagcagcccta
gaggtggaagatggacggaaacggagttttgaagagctaagagcactggaatctgaggct
cgtgatagacgatttcctaacagtgagctgcttcagcgattgaagaaatgcctaactgaa
gcagaggcttgtatttcccaagttctaggactgatcagtaactcagaggacaggtcacaa
acaccacaaatcacccttactgaactacagattcttctcaaacagatgggcactctgccc
tgtaccatgcatcagattgatgaagttaaggatgttcttcaacaggtggaaacataccaa
attgagacccgtgaagctctaacttcactgccttatagtttagaaatacttaagtccctg
atggaaaagggtcagcagcttcgtgtggaagtgcctgaagctcatcagcttgaagagctg
ttggagcaggcacaatggctagatcaagtgaagcaggccctagctccttcaggccagaga
cactctctggtcatgatgaagaagcttttagttatgggaaccaaggtatcctccagccct
tctgtgaacaaagctcgagcagagctacaagaactgctgactgttgcagaatgttgggag
gaaaaggcccatttctgcttagaagctagccaaaagcattctccagccactttggaagtt
ataatacgtgaggcagaaaacatccctgtctacttgcctaacatccagtctctgaaggaa
gctctgactaaggcacaggcttggattgctgatgtgaatgagattcaaaatggggatcac
tacccgtgtttggatgatttggaaggccttgtagctgttggtcgggatttacctgtggag
ctggaggaactgagacagctggagaatcaggtactgacagcacattcctggaaagagaaa
gcttctaagacttttctcaagaagaattcttgctacacactgttggaggttctttgccca
tgtgcagatgctggttcagtcagcaccaaacgcagtcggtggattgaaaaggagatgggg
ttatacaaatatgacacagaattgctggggctgtctgcccaggacctcagggacccaggg
tctgtgatcatggcctttaaggaaggggaagaaaaagaaaaggaaggtatcttgcactta
cgtcacatcaactcagccaaacccagtccaatgtcctcatcgatgaatacctctgcaacc
tccatctgtgtatgtgggcaggtttgtgcaggagtggaagccctgcagtgtgatctgtgt
catgactggttccatggacaatgtgtgactgtaccccatctactcagctccctaagggcc
aatcatacctcttctcaactactagcttggtgggaatggaacaccaaattcctgtgccca
ctgtgtatgcgatcaaggcgtccacgcctggagaccatcttgtcattgctagtaggacta
cagagactgtctgtaaggctgcccgagggtgaggccctacagtgcctcacagagagagcc
attggttggcaaggccgtgccagacaggctctagcttctgaggatgtaactgctttgttg
aaacagctagcaaaatcccgccaacaactacaggatgaattgaggcatgagaagccctct
actttgccttcaggccttgcctctgactgtatcacagaggatagtggcaaagatactctt
aaggaagaggaggagttggtactaaatgaagacaggttgaaaagttctgagaagattgtt
ccaaaggaaagttcatgtaaaagagatgaggaactgctgccttcgcttttatcccaatta
actggtccagtacttgagctgcctgaagctacacgggcgcctctagaggagcttatgatg
gaaggagatctacttgaagttactctggatgagaaccacagcatttggcagctgctgcag
gctgggcagaatcccaatctagagcggattcatacacttctagagcttgagaagcctgag
aacccagggagttcagagcaacagataccagagaggaggcggcggcggaggcaaaaggtg
gttctgagtagaaagggtgaggattttattcaaaaagagctagaatcaaaaagagtcagg
agttcaaggattaagcctaaggaagaaaagtttcaagagccgatacatggggataatgtg
ctcttgacacaccgtacagaacatacagacatcttaaaagatcacatgaacagtgtacaa
gaaaaggatccaagcccttcatcttcttttccgtccttaacacctttgctacacctatct
tattttcatcagcaaaaattacaacaatag

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