Mastomys coucha (southern multimammate mouse): 116096694
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Entry
116096694 CDS
T07224
Symbol
Yars1
Name
(RefSeq) tyrosine--tRNA ligase, cytoplasmic
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
116096694 (Yars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mcoc01007
]
116096694 (Yars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mcoc03016
]
116096694 (Yars1)
03029 Mitochondrial biogenesis [BR:
mcoc03029
]
116096694 (Yars1)
Enzymes [BR:
mcoc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
116096694 (Yars1)
Amino acid related enzymes [BR:
mcoc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
116096694 (Yars1)
Transfer RNA biogenesis [BR:
mcoc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
116096694 (Yars1)
Prokaryotic type
116096694 (Yars1)
Mitochondrial biogenesis [BR:
mcoc03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
116096694 (Yars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
tRNA_bind
Motif
Other DBs
NCBI-GeneID:
116096694
NCBI-ProteinID:
XP_031234612
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MQPDGTSVTVPGTRRRRRTRKGRGCRLSAGNRESGAMGDAPSPEEKLHLITRNLQEVLGE
EKLKEILKERELKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEVTILFADLHAYLDNMK
APWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHD
AKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFAEKYLPALGY
SKRVHLMNPMVPGLTGSKMSSSEEESKIDLLDRKEDVKKKLKKAFCEPGNVENNGVLSFI
KHVLFPLKSEFVILRDEKWGGNKTYTVYLELEKDFAAEVVHPGDLKNSVEVALNKLLDPI
REKFNNPALKKLASAAYPDPSKQKSAAKGPAKNSEPEEIIPSRLDIRVGKILSVEKHPDA
DSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCNLKPQKMRGVDSQGMLLCAS
VEGVSRQVEPLDPPVGSAPGERVFVQGYEKGQPDEELKPKKKVFEKLQADFKISEECIAQ
WKQTNFMTKLGFISCKSLKGGNIS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgacgggactagcgtgacagttcccggcacgcggagacggcggcggacgagg
aaagggcgcgggtgccggctgagcgcgggaaacagagaaagcggagccatgggtgatgct
ccaagccctgaggagaagctgcaccttatcacccggaacctgcaggaggttctgggggaa
gagaagctgaaggagatcctgaaggagcgggaacttaaaatttactggggcacagccacc
acggggaagccacatgtggcttactttgtacccatgtccaagatcgctgacttcttgaag
gcagggtgtgaggtaaccatcctgtttgcggacctccatgcatacctagacaacatgaaa
gctccctgggaacttctagaacttcgaaccagttactatgagaatgtgatcaaggcaatg
ctggagagtattggcgtgcccttggagaagctcaagtttatcaaaggcaccgactatcag
ctaagcaaagaatacacactggatgtgtaccgactgtcctccgtggtcacacaacacgat
gccaagaaagccggggctgaggttgtgaagcaggtggagcacccattgctgagtggtctg
ttgtaccccggtctgcaggctttggatgaggagtacttaaaagtcgatgcccagtttggc
ggtgttgaccagaggaagatctttacctttgcagagaagtatctccctgcacttggctac
tcaaaacgggtccatctgatgaatcccatggtccctgggttaactgggagcaaaatgagc
tcgtcagaagaggagtccaaaatcgacctacttgatcggaaggaggacgtgaagaaaaag
ctgaagaaggccttctgcgaacccggcaatgtggagaacaacggggttctgtccttcatc
aagcatgtcctctttcctctcaagtctgagtttgtgatcctgagagatgagaagtggggt
ggaaacaagacctacactgtttacctggagctggagaaggacttcgctgctgaggttgta
caccctggagacctaaagaattctgttgaagttgccctaaacaagttgctggaccccatt
cgagaaaagtttaacaacccagccctgaagaagctagccagtgctgcctacccagatcct
tcaaagcagaagtctgctgccaaaggccctgccaagaactcagaaccagaggaaatcatc
ccatcccggctggatatccgtgtgggcaaaatcctcagcgtggaaaagcatccagatgca
gatagcctgtatgtggagaagattgatgtcggggaagctgaacccaggactgtggtgagc
ggccttgtacagtttgtgcccaaagaagaactacaggacaggctggtggtggtactgtgt
aatctgaaaccccagaagatgagaggagtggactcccagggcatgctactgtgtgcttct
gtagaaggggtaagccgccaggttgaacctctggatcctcctgtcggctctgctcctggt
gagcgggtatttgtacagggctatgagaagggccaaccagatgaggagctcaagcccaaa
aagaaggtctttgagaagctgcaggcggactttaaaatttctgaggagtgcattgcacaa
tggaagcagaccaacttcatgaccaagctggggttcatctcctgtaaatcactaaaaggg
ggtaacatcagctag
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