KEGG   Mastomys coucha (southern multimammate mouse): 116096700
Entry
116096700         CDS       T07224                                 
Symbol
Rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03082  ATP-dependent chromatin remodeling
mcoc03083  Polycomb repressive complex
mcoc04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    116096700 (Rbbp4)
   03083 Polycomb repressive complex
    116096700 (Rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    116096700 (Rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mcoc03036]
    116096700 (Rbbp4)
Chromosome and associated proteins [BR:mcoc03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     116096700 (Rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     116096700 (Rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     116096700 (Rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     116096700 (Rbbp4)
    PRC2.2
     116096700 (Rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     116096700 (Rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    116096700 (Rbbp4)
  Chromatin remodeling factors
   NuRD complex
    116096700 (Rbbp4)
   NuRF complex
    116096700 (Rbbp4)
   NuRF complex (fruit fly)
    116096700 (Rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 116096700
NCBI-ProteinID: XP_031234629
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgacaaggaagcggcctttgacgacgcggtggaagaacgcgtgatcaacgaggag
tacaaaatatggaagaagaacaccccttttctttatgatttggtgatgacccatgccctg
gagtggcccagcttaactgcccagtggcttccagatgtgaccaggcccgaagggaaagat
ttcagcattcatcggcttgtcctgggaacacacacatctgatgaacaaaaccacctggtg
atagccagtgtccagctccctaatgatgatgctcagtttgatgcatcccattatgacagt
gaaaaaggagaatttggaggttttggttctgtcagtgggaaaattgaaatagaaatcaag
atcaaccacgaaggagaagtcaacagggcccggtacatgcctcagaacccttgcatcatt
gcaaccaagactccatccagtgatgttcttgtttttgactacacaaagcacccttctaaa
ccagacccttctggagagtgcaacccggatttgcgtcttcgtggacatcagaaggaaggc
tatgggctttcctggaacccgaatctcagcgggcacttactcagtgcttcagatgaccat
accatctgcctatgggacatcagtgcagttccgaaagaaggaaaagtggtggatgcaaag
accatcttcacagggcacacagcagtcgtggaggacgtttcctggcatctgctccacgag
tctctgtttgggtctgttgctgatgatcagaaacttatgatttgggacactcgttcaaac
aacacttccaagccaagccactcagttgatgctcatacagctgaagtgaattgcttatct
ttcaacccctatagtgagttcattcttgccacaggatcagctgacaagactgttgccttg
tgggatctgagaaatctgaaactcaagttgcattcctttgaatcacataaggatgaaata
ttccaagttcagtggtcacctcacaatgagactatcttagcttctagtggtactgatcgt
aggctgaatgtctgggatctaagtaaaattggagaagagcagtccccagaagatgcagag
gatggcccaccagagttgttgtttattcatggtggtcacactgccaagatatctgacttc
tcttggaatcccaatgaaccttgggtgatttgttctgtatcagaagacaatatcatgcaa
gtgtggcagatggcagagaacatttataatgatgaagaccctgaaggaagtgtggatcca
gaaggacaaggatcctag

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