Mastomys coucha (southern multimammate mouse): 116096735
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Entry
116096735 CDS
T07224
Symbol
Sdc3
Name
(RefSeq) syndecan-3 isoform X1
KO
K16337
syndecan 3
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04514
Cell adhesion molecules
mcoc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116096735 (Sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116096735 (Sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mcoc00535
]
116096735 (Sdc3)
Proteoglycans [BR:
mcoc00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
116096735 (Sdc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
116096735
NCBI-ProteinID:
XP_031234719
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MKPGPPRRGTAQGQRVDTATHAPGARGLLLPPLLLLLLAGRAAGAQRWRNENFERPVDLE
GSGDDDSFPDDELDDLYSGSGSGYFEQESGLETAMRFIPDMALAAPTAPAMLPTTVIQPV
DTPFEELLSEHPSPEPVTSPPLVTEVTEVVEEPSQRATTISATTSTTEATTTGAPTMATA
PAMAATTAPSTPAAPPATATTTDVRTTGIQGLLPLPLTTAATAKATTPAAPLLPTTVATL
DTETPTPRLVSTATSRPRALPQPVTTQEPDAAERTTLPLGTTASGPTEVAQTPTPESLLT
TIQDEPEVPVSGGPSGDFELQEETTQPDTANEVVAVEGAAAKPSPPLGTLPKGARPGPGL
HDNAIDSGSSAAQLPQKSILERKEVLVAVIVGGVVGALFAAFLVTLLIYRMKKKDEGSYT
LEEPKQASVTYQKPDKQEEFYA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgggccgccgcgccgcgggaccgcacaggggcaacgcgtggacaccgccacc
catgcgcccggggcccgcgggctgttgctgccaccgctgctgctgctgctgctggccggc
cgcgccgcgggggctcaacgctggcgcaatgagaacttcgagaggccggtggatcttgag
ggctcaggggacgacgactcgtttcctgatgatgaactggacgacctctactcggggtct
ggctctggctacttcgagcaggagtccggccttgagacagccatgcggttcatccctgac
atggccctggctgcacccaccgcaccggccatgctacccacgaccgttatccagcccgtg
gacaccccgtttgaggaactcctttctgagcaccccagccccgaaccagtcaccagtccc
cctctggtgacagaggtgacagaagtcgtggaagagcctagccagagagctaccaccatc
tctgccaccacatctaccactgaggccaccaccacaggggccccgactatggccacagca
cctgccatggcagccaccactgcccctagcactcccgcggcacccccagccacggccacc
acgactgacgtaaggaccaccggcatacaggggctgctgcctcttcccctgaccacggct
gccacagccaaggccactaccccagcagcacccttactgcccactactgtggctaccttg
gacacagagaccccgacacctaggctggtcagcacagctacctcgcggccacgagccctt
cctcagccagtcaccacccaggagcctgatgctgctgagagaactaccctgccattgggg
accaccgcttctggacccacagaggtggctcagaccccaactccagagtcccttctgacc
accatccaggatgagccagaggttccagtaagtggggggcccagcggggactttgagctg
caagaagagaccacacagccggacacggccaatgaggtggtggctgtggaaggagccgct
gccaagccgtcacctccattggggacactgcccaagggtgcccgcccagggcctggcctc
cacgacaatgccatcgactcgggcagctcggccgcccagctccctcagaagagcatacta
gagcggaaggaggtgctcgtagccgtgatcgtaggtggggtggtgggtgccctcttcgct
gccttcctggtcacgttgctcatctaccgcatgaagaagaaggacgaaggcagctacacc
ttggaagagcccaagcaggccagtgtcacataccagaagcctgacaagcaggaggagttc
tacgcttag
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