Mastomys coucha (southern multimammate mouse): 116096830
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Entry
116096830 CDS
T07224
Symbol
Srrm1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116096830 (Srrm1)
03015 mRNA surveillance pathway
116096830 (Srrm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116096830 (Srrm1)
03041 Spliceosome [BR:
mcoc03041
]
116096830 (Srrm1)
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
116096830 (Srrm1)
Spliceosome [BR:
mcoc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
116096830 (Srrm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
116096830
NCBI-ProteinID:
XP_031234904
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASLKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKSPELPEPSVRMKDSSVQEATS
TSDILKAPKPEPVPEPKEPSPEKNSKKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSTR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGSKMAAADSVQQR
RQYRRQNQQSSSDSGSSSTSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RMQMGKRWQSPVTKSRRRRSPSPPPARRRRSPSPAPPPPPPPPPRRRRSPTPPPRRRTPS
PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPQPKRRASPSPPPKRRLSHSPPPKQ
RSPPVTKRRSPSLSSKHRKGSSPGRSTREARSPQPNKRHSPSPRPRAPQTSSPPPVRRGA
SASPQGRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP
PAPPSPVQSQSPSTNWSPAAPARKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKK
HKKHKKHKKEKAVAAATPAPAAPAALSAAATTSAQEEPAAAPEPRKETESEAEDDNLDDL
ERHLREKALRSMRKAQVSPQS
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggagcaggataatcggttcagcaacaaa
cagaagaaactcctcaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgagatcctt
ggattcgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaaccca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaagaatgctagagaa
ttcatgggagaactgtggcccctgctgttaagtgcacaagaaaatatcgctggaatcccc
tctgctttcctagagctgaagaaggaagagataaaacagagacaaattgaacaagaaaag
ttggcatctctgaaaaaacaagacgaagataaagataagagggataaagaagaaaaagaa
agcagcagagagaagagggagcgttctcgaagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcactctcgatct
ccccgtcacagaaccaagagccggagcccttcccctgccccagaaaagaaggaaaaatcc
ccagagctcccagaaccatcagtgagaatgaaagactcttcagtacaggaggccacgtct
accagtgacatcctgaaagctcccaagcctgagcctgtaccagagcccaaagaaccatct
ccagaaaaaaattccaaaaaggaaaaggaaaagactcgaccaagatctcggtcacgctcc
aaatcacggtctcggacccggtctcggtcaccttcgcataccagaccaagacggcgccat
agatctcgatcaagatcatactctcctagaaggcggccaagcccaagaaggcggccatct
ccccgaagaagaactccaccaagacggatgcctcctccaccaaggcacaggaggagtagg
tctccaggcagacggaggagacgttcttccgcatcactgtctggaagtagctcgtcatcc
tcttcatctcggtcccggtcaccgccaaagaagcctcccaagaggacatccagccctcct
cggaaaacgcgtaggttatcaccttcagcaagccctccacggcgaaggcaccggccatca
tctccagcaactccaccacccaaaactcgccattccccaactccccaacagtcaacccgt
acaagaaagagtcgcgtttctgtgtctccaggaagaacctctggtaaagtgacaaaacat
aaaggtactgagaaaagagagtcaccttctccagccccaaagcctagaaaagtggagtta
tcggagtctgaagaagacaaaggcagcaaaatggctgcagctgattctgtgcagcagagg
cgacagtacagacgacagaaccagcagtcttcatctgactctggctcctcttccacctca
gaagatgaacggcccaagagatcccatgtgaagaacggtgaggtaggcaggcggcggaga
cattccccttctcggagtgcctctccatcacctcgaaagcgccaaaaagagacttcccct
cggatgcagatgggaaagcgatggcagtcaccagtgactaaaagtagaaggaggagaagt
ccctccccacctcctgccagaaggcgacgatctccttctccagctcctcctccccctcct
cctcctccccctcggcggcgcagatctcctaccccaccaccacgaagaaggaccccttct
cctcccccacgccgccgctctccatctccaaggagatactcccctcccatccagaggaga
tattctccctcccctcctccgaagaggaggactgcctcgcccccaccccagcccaagcga
agggcatcaccgtctccaccaccaaaacgccggctctcccactctccacctcctaagcaa
agaagccccccagtcaccaagagacgctcgccctccttatcttcaaagcataggaaaggc
tcttccccaggccgctccacccgggaggcccggtcaccacaaccaaacaagcggcattcg
ccctcacctcggcctcgggctcctcagacctcaagccctccccctgtccgcagaggagcc
tcagcgtcaccccaaggaaggcagtccccatctccaagcactaggcctattaggagagtc
tccaggactccggagcccaaaaagatcaaaaaggctgcctcaccaagccctcagtccgta
agaagggtttcatcttccaggtccgtctctggatctcctgagccagcagctaaaaagcct
ccagcacctccctctcctgtgcagtctcagtcaccctccacaaactggtcacctgcagca
ccagccagaaaggctaaaagcccgacaccaagcccgtcccctgccaggaattctgatcaa
gaaggaggtggaaagaaaaagaagaagaagaaggacaagaaacacaagaaggataagaaa
cacaagaagcacaaaaaacacaagaaggagaaggctgtggccgcagccaccccagctcct
gcagcccctgcagctctttctgctgccgccaccacatcagcacaggaagagcctgcagca
gcaccagagcccaggaaggagaccgagagtgaagctgaagatgacaacctagatgactta
gagaggcacctacgggagaaggccctgcgatccatgcggaaggctcaagtgtccccacag
tcctaa
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