Mastomys coucha (southern multimammate mouse): 116097033
Help
Entry
116097033 CDS
T07224
Symbol
Ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04120
Ubiquitin mediated proteolysis
mcoc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116097033 (Ube4b)
04120 Ubiquitin mediated proteolysis
116097033 (Ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116097033 (Ube4b)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116097033 (Ube4b)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
U-box type E3
116097033 (Ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
116097033
NCBI-ProteinID:
XP_031235356
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPTTPLTSPQRENPPGPPIAASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSDKEPSSGPEVSEEQALQLVCKIFRVSWEDRDRDVIFL
PSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLNTGSNSGTSPMFCNLGSFSASSLSSLGASGGASNWDSYSDHFTIEACRETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLHGALTQPRSLQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPILQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPMCNLVASLPLWLPKSLSPGSGRELQRLSYLGAFLSFSVFAEDDAKVVE
KYFSGPAITLENTRVVSQSLQHYLELGRQELFKILHSILLNGETREAALSYMAAVVNANM
KKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPRCRISLPNDETRINA
TMEDVNEWLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKNNESQWKDSPLATRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLMLRILDPAYPDVTLPLNSEVPKVFAALPEFYVEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLAQDERVSRSYLAL
ATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTESMLEPMPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgacggaggcgcctggcacgacttgctggtgga
cagacctcccagccgaccaccccgcttacatctcctcagagggagaaccctccgggacct
ccaatagctgcatcagccccaggcccctcccagagtcttggtctcaatgtccacaacatg
accccagctacctcccccataggtgcagcaggagttgcccaccggagccagagcagcgaa
ggcgtcagttctcttagcagctcaccttccaacagccttgagacacaatctcagtccctc
tcacggtcccagagcatggatattgacggtgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcgggaatcgagaatatggaggtggacgagaatgaccgaagagaaaagcgg
agcctgagtgacaaggagccttcttcaggtcctgaggtgtctgaagagcaggccttacag
ctggtctgtaagatcttccgagtctcctgggaggaccgcgacagagacgtcatcttcctt
ccttctctctctgcgcagtttaaacagaacccgaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtgctgatgatgtccactcagacacgagatgaaaat
ccatttgccagtctgacagcaacatcccagcccatcgccacggcagctcggtcaccagac
agaaatctcatgctaaacactggctccaattcaggaacaagccccatgttctgcaacctg
ggctccttcagcgccagctccttgtctagtttgggagcctctggtggagcaagtaactgg
gattcgtacagtgaccatttcaccattgaagcctgcagagagacggacatgctgaactac
ctcatcgagtgctttgaccgagtcggaatagaggagaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccaacttctcagcaacatccgttcgcagtgcatctcccacaccgca
ctagtgctgcacggagccctcacacagcccaggtccttgcaacagccatccttcctcgtg
ccgtacatgctctgcaggaacctcccgtacggcttcattcaggagctggtgaggaccact
caccaggatgaagaggtgttcaagcagatctttatccccattttacaaggcctggcgctt
gctgccaaagagtgctccttggatagcgactactttaagtaccccctcatggcgctgggt
gaactctgtgaaaccaagttcgggaagacacaccctatgtgcaatttggtcgcctctcta
cccctgtggttgccgaagtccttaagccctggctctgggcgggagctgcagaggctctcc
tacttaggggccttcttgagcttctcagtcttcgcagaggacgacgcaaaggtggttgag
aaatacttctcagggcccgccattaccctggagaacacccgcgtggtcagccagtcacta
cagcattacctggagctgggacggcaagagcttttcaagattctacatagtattttgtta
aacggcgaaactcgtgaagcggctctcagttacatggcggctgtcgtcaatgccaatatg
aagaaagcccagatgcaggcagatgatcggttggtgtctacagacgggtttatgctgaat
ctcctttgggtcctgcagcagctaagtacaaagatcaagttagaaacagtcgaccccact
tacatattccacccaagatgtcggatctccctcccaaatgatgagacacggataaatgca
acgatggaggatgtgaatgagtggctgacggagctctatggcgatcagcctccattttct
gagccaaaattccctacggaatgtttctttctcaccctgcacgctcaccacctctctatt
ctgcctagttgtcgtcggtacattcgccgactccgagccatccgtgagctcaatagaacc
gtcgaagatttgaaaaataatgaaagccaatggaaagattccccactggccaccagacac
cgtgaaatgttgaagcgctgtaaaactcagcttaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctaagaagatgtctgaatttttatggcctt
ctcattcagctgatgctgcgcatcctggaccctgcatatcctgacgtaacactgcctttg
aattcagaagtccccaaggtatttgcagcattgcctgagttttatgtagaagatgttgct
gaatttttattttttatcgtacaatactctcctcaggtgctctatgagccctgcactcag
gacattgtgatgttcctcgttgtgatgctgtgcaaccagaactacatccgaaacccttac
ctagtggccaagctggtggaggtcatgtttatgaccaacccctctgtgcagccgagaact
cagaagttttttgaaatgattgagaaccatcctctctccaccaaattgctagtaccttcc
ctcatgaagttctacacagatgtcgagcataccggagccaccagcgagttctatgacaag
ttcacaattcgctatcacattagcactatttttaaaagcctttggcaaaacatagctcac
catggtaccttcatggaggagttcaattctggaaagcagttcgttcggtacatcaatatg
ctgataaatgacacgaccttcttactggatgaaagtctggagtccctgaagcggatccat
gaagtgcaagaagagatgaagaacaaagaacaatgggaccagttacctcgggatcagcag
caggcccggcagtctcagctcgctcaggatgagcgtgtctcccgttcttatcttgccctg
gcaactgaaaccgtggacatgttccatctcctcaccaagcaagtccagaagccgttcctg
aggccagagcttggtccccgattagcagccatgctgaactttaacctgcagcagctctgc
ggacccaagtgccgggacctgaaagttgaaaacccagagaagtatggttttgagccaaag
aagctgttggaccaactgacggatatctacttacagctggactgtgctcgctttgccaaa
gccatcgccgacgaccagcgatcatacagcaaggaactgttcgaggaagtcatttcaaag
atgcgcaaggcaggaatcaaatccaccatcgcaatcgagaagtttaagctgcttgccgag
aaagtggaggaaatcgtggcaaagaatgcgcgggcagaaattgactacagtgatgccccc
gacgagttcagagatcctctgatggacaccctgatgaccgatcccgtgagactgccctcg
ggtaccatcatggaccgttctatcatcctgcggcatctgctcaactcccccaccgacccc
ttcaaccgccagatgctgactgagagcatgctggaaccaatgccagagctgaaggaacag
attcaggcgtggatgagagagaaacagagcagtgaccactga
DBGET
integrated database retrieval system
