Mastomys coucha (southern multimammate mouse): 116097059
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Entry
116097059 CDS
T07224
Symbol
Cdh20
Name
(RefSeq) cadherin-20 isoform X1
KO
K06807
cadherin 20, type 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116097059 (Cdh20)
Cell adhesion molecules [BR:
mcoc04515
]
Cadherins
Major cadherins
116097059 (Cdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_2
Cadherin_4
TAS2R
Wzy_C
Motif
Other DBs
NCBI-GeneID:
116097059
NCBI-ProteinID:
XP_031235418
LinkDB
All DBs
Position
Unknown
AA seq
801 aa
AA seq
DB search
MWTTGRMSNAKSWFGLGTSLYFWALMDLATTVLSSTPMPEVELETLFSERPQSHQRSKRS
WVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQ
RLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDINDNEPKFLDGPYIATVPEMSPV
GTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDSKTGVIRTALMNMDREAKEYYEV
IIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQKHYQMSVLESAPISSTVGRVFAKD
LDEGINAEMKYTIVDGDGTDVFDINTDQNFQVGIITVKKPLSFESKKSYTLKVEGSNPHL
EMRFLNLGPFQDTTTVHISVEDVDEPPVFEPGFYFVEVPEDVTIGTTIQIISAKDPDVTN
NSIRYSIDRGSDPGRFFYVDITTGALMTARPLDREEFSWHNITVLAMEMNNPSQVGSVAV
TIKVLDVNDNAPEFPRFYEAFICENAKAGQLIQTVSAVDQDDPHNGQHFYYTLAPEAANN
PNFTVRDNQDNTARILTRRSGFRQQEQSVFYLPILIADGGQPVLSSTGTLTIQVCSCNDD
GHVMSCSPEAYMLPVSLSRGALIAILACIFVLLVLVLLILSMRRHRKQPYIIDDDENIHE
NIVRYDDEGGGEEDTEAFDIAALWNPREAQAGAAPKTRQDMLPEIESLSRYVPQTCAVSS
TVHSYVLAKLYEADMDLWAPPFDSLQTYMFEGDGSVAGSLSSLQSATSDSEQSFDFLTDW
GPRFRKLAELYGASEGPTPLW
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgtggactacaggtagaatgagcaatgcaaagagttggtttggacttggcacatccttg
tacttctgggcactgatggaccttgcaaccaccgttctctccagcactccgatgccagaa
gttgaattagaaacactcttctcagaaaggccacagtcacatcagcgaagcaagaggagc
tgggtttggaatcagttttttgtcctggaagagtacactgggactgaccctttgtatgtt
ggcaagcttcattcagacatggacaggggtgatggatccatcaaatacatcctttcagga
gaaggagcaggcatcgtgtttaccattgatgacaccactggagacatccatgccattcag
aggctggaccgagaggaaagagcccaatatactctaagggctcaagccctagataggaga
acaggccggccaatggagccagaatcagagttcattatcaaaatccaagatatcaatgac
aacgagcccaagttcctggatggaccttacattgccactgtgccagaaatgtcaccagta
ggtacatctgttatccaagtgacagccacagatgctgatgacccaacctatggcaacagt
gcccgggtagtgtacagcattctccagggccagccatatttttctgtggactccaaaaca
ggagtaatcagaacagctcttatgaacatggacagagaagccaaggaatactatgaagtg
attatccaagccaaggacatgggagggcaacttggaggattggctgggaccacaacagtc
aacatcaccctctcagatgtcaatgataacccaccccgatttccacagaaacattatcag
atgagtgtgctagaatcggctccaattagctctactgtgggcagagtgtttgctaaggat
ctggatgaaggaatcaatgcagagatgaagtataccattgtggatggagatggtacagat
gtttttgatattaatacagaccaaaacttccaagttggcatcataactgtgaagaagccc
ctgagttttgaaagcaagaaaagctacaccctgaaggtggaaggatccaatcctcaccta
gagatgcgttttctgaacctgggcccatttcaggacacaacaacagtgcacatcagtgtg
gaggatgtggacgagccccctgtgtttgagcctggcttttattttgtggaggtgccagag
gatgtgacaattggaacaaccatacagatcatttctgctaaggacccagacgtaaccaac
aactcgatcagatactccattgacagaggcagcgacccgggaagatttttctatgttgac
attacaacaggtgctttaatgactgcaagaccactagacagagaagagttttcctggcat
aatataaccgtccttgctatggaaatgaacaatccctcccaagtgggaagtgttgctgtc
acaatcaaagtcctcgatgtgaatgacaatgcaccagagtttcccagattctatgaagct
tttatctgtgaaaatgccaaagcaggacagctgattcagacagtcagtgctgtggatcaa
gatgaccctcacaatggtcaacatttctactacactttggcacctgaggctgctaacaac
cccaacttcactgtcagagacaaccaagataatactgctcggattctgaccaggaggtcc
ggcttccgacagcaggagcagagcgtcttctacctgcccatcctcatagcagacggcggc
cagccagtcctcagcagcaccggcacacttaccattcaagtgtgcagctgcaatgacgat
ggccatgtcatgtcctgcagcccagaggcctacatgctcccagttagtttgagtcggggt
gctctcatcgccatcctggcctgcatctttgtcctcttagtgttggtactactcatcctg
tccatgaggcgacaccgaaaacaaccttacatcattgacgacgatgagaacatccacgag
aacattgtgcgctacgacgacgaggggggcggcgaagaggacacagaggccttcgacatc
gcagccctatggaacccgcgtgaggcgcaggcaggcgctgctcccaagacacggcaggac
atgctccccgagatcgagagcctctcccgctatgtgcctcagacctgcgcggtcagcagc
acggtccacagctacgtgctggccaagctctacgaggctgacatggacctgtgggcgccg
cccttcgactccctgcagacctacatgtttgagggggacggctccgtggcgggctcactc
agctccctgcagtcagccacctcagactcagagcagagctttgatttcctcacggactgg
ggaccccgcttcaggaaactggcagaactctacggggcgtcggaggggcccacgcccttg
tggtga
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