Mastomys coucha (southern multimammate mouse): 116097097
Help
Entry
116097097 CDS
T07224
Symbol
Chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116097097 (Chd5)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116097097 (Chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_CHD1_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
116097097
NCBI-ProteinID:
XP_031235485
LinkDB
All DBs
Position
Unknown
AA seq
1951 aa
AA seq
DB search
MRGPLGTEEELPRLFAEEMENEEEMSEEEDGGFEGFEDFFPAEPVSLPKKKPKKLKEIKS
KGKRKKKEGSNDEMSENEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKAKRKKRDEDED
DNDDGGLKEPKSSGQLMAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIPM
SKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQVPQPLPIRK
AKTKEGKGPGVRKKNKGAKDSKKKGRGKRVAGLKFRFGGISKRKKGSSSEEDEREDSDLD
NASIHSSSVRSECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCP
RAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEFCRVC
KDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPA
PFVVGLPGPEVEPGMPPPRPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNY
QRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSF
DKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKK
GKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI
LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG
DKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWA
CLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLE
GFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKF
ILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKS
SGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEA
IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKK
VMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFK
DDVEGMMSQGQRPTTPIPDVQSTKGGSLAAGAKKKHGSTPPGDNKDVEDSSVIHYDDAAI
SKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEK
LLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQGACEWQDELSDNQSEYSIGSEDE
DEDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRW
GMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQH
VLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGPEGKKPGEVISSDPNTPVPASPAQLA
PAPLGLPDKMEAPLGYMDEKESGMQKPKKSLEIQAPPTALDKIEGEDRQQSSDSKDRARE
ERMEEVEKAQGSPEQPLKEEVLPDKEPIPDKLELSLGHSGDFRPDDPKAEEKEPMETQQN
GDREEDEESKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYW
LLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIE
EQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQ
LEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMY
NNSFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggaggagatggag
aacgaggaggagatgtcagaagaagaagatggtggcttcgaaggctttgaggacttcttc
cctgcagagcccgtgagccttcccaagaagaagccgaagaagctgaaagagatcaagtcc
aaagggaaacggaagaagaaagaggggagcaatgatgagatgtcggaaaatgaggaggat
ctggaagagaagtcagagagcgaaggtagtgactactcccccaccaagaagaagaagaag
aaactgaaggagaagaaggagaagaaggccaagcggaaaaagagggatgaggatgaagat
gataatgatgatggaggcttgaaggagcccaagtcctcgggacagctcatggccgagtgg
gggctcgatgatgtggactacctgttttctgaggatgactaccacacactgaccaactac
aaagccttcagccagttcctccggccgctgattgccaagaagaacccgaagatccccatg
tccaaaatgatgactgtcctgggggccaagtggcgagagttcagtgccaacaacccgttt
aagggcagctcggcagcagcagctgcagcggccgtggcggccgccgtggagacggtgacc
atcgctcctcccctggccatcagtccccagcaagtgccccagcctctgcccatacgcaag
gccaagaccaaagagggcaaggggcccggagtgaggaagaagaacaaaggtgccaaagac
tccaagaaaaagggcaggggcaagagagtggcagggctcaagttccgcttcggagggatc
agcaagaggaagaagggttcctcgagtgaggaggatgagcgggaggactcagatttggac
aatgccagcatccacagctcttctgtgcgttctgagtgctctgcagctctggggaagaag
aacaagaggaggcgcaagaagaagaggattgacgatggtgacggctatgagacagaccac
caggactactgtgaggtgtgccagcagggaggcgagatcattctctgtgacacctgcccg
agggcgtaccacctggtctgcctggacccggagctggagaaggctccagagggcaagtgg
agctgcccacactgtgagaaggaggggatccagtgggagccgaaggatgacgacgaggaa
gaggaggagggcggctgcgaggaggaggaggatgaccacatggagttctgccgcgtgtgc
aaggacggcggcgagctcctgtgctgtgacgcctgcccttcttcctaccacttgcactgc
ctcaacccgccactgccggagatcccgaacggtgaatggctctgcccacgctgtacatgc
cccccgctgaagggcaaagttcagcggatcctacactggaggtggacggaacctccagct
ccctttgtggtggggctgccaggaccagaggtagagccaggcatgcccccgcccaggcct
ctggagggcatacctgagagagagttctttgtgaagtgggctggtctttcctactggcac
tgctcctgggtgaaggagctccagctggagctgtaccacaccgtgatgtatcgcaactac
caaagaaagaatgacatggacgaaccgcctccctttgattacggctctggcgatgaggac
ggtaagagcgagaaacggaagaacaaggaccctctctacgccaagatggaggaacgcttc
taccgctacggcatcaagcccgagtggatgatggtccaccgcatcctgaaccacagcttt
gacaagaagggggacgtgcattacttgatcaagtggaaggacctgccctacgaccagtgc
acctgggagattgatgagatcgacatcccctactatgacaacctgaagcaggcctactgg
ggccacagggagctgatgctgggagaggatgcgaggctgcccaagaggctggtgaagaag
ggcaagaagctgaaggacgataaacaagagaagccacccgatacacccatagtggatccc
acagtcaagttcgacaagcagccatggtacatcgactccacaggaggcacgctgcaccct
taccagctggagggccttaactggttacgcttctcctgggcccagggcactgacaccatc
ctggcagacgagatgggcctgggcaagacggtgcagaccatcgtgtttctctattctctg
tacaaggagggccactccaaggggccttacctggtcagtgcgcccctgtccaccatcatc
aactgggaacgggagtttgagatgtgggcgcctgacttttacgtggtcacctacacgggg
gacaaggagagccgctctgtgatccgtgagaacgagttttcctttgaggacaacgccatt
cgcggtgggaagaaagtattccgcatgaagaaggaagtgcagataaaattccacgtgctg
ctcacttcttacgagctcatcaccattgaccaagccattctgggctccattgagtgggcc
tgccttgtggtggacgaggctcaccggctcaagaacaaccagtccaaattctttcgggtc
ttgaatagctacaagatcgactacaagctgctgctgactgggaccccccttcagaacaac
ctagaggagctgttccacctcctcaacttcctgactccagagaggttcaacaatctggaa
ggcttcttggaggagtttgccgacatctccaaggaagatcagatcaaaaagctgcatgac
ctgttggggccgcacatgcttcggcggctcaaggccgatgtgttcaagaacatgccggct
aagacggagctgattgtccgagtggagctgagccagatgcaaaagaagtactacaagttc
atcttgacacgcaacttcgaggcgctcaactccaaggggggcggcaaccaggtgtctctg
ctcaacatcatgatggacctgaagaagtgctgcaaccatccgtaccttttcccagtggct
gccgtggaggcccctgtattgcccaatggctcttacgatggcagctccctggtcaagtct
tcaggaaagctcatgctgctgcagaagatgctcaagaagctgcgggatgaaggacaccgg
gtgctgatcttctcccagatgaccaagatgttggacctcttggaggacttcctggagtat
gagggctacaagtatgagcggattgatgggggcatcacagggggcctccggcaagaggcc
atcgacagattcaatgctcctggggcccaacagttctgctttctgctctcaacacgtgcc
ggtggcctgggcatcaatctggccacagcagacacggtcatcatttatgactcggactgg
aacccccacaatgacatccaggccttcagccgtgctcaccgcatcgggcagaacaagaag
gtcatgatctaccgctttgtgacacgggcctccgtggaggaacgcatcactcaggtggcc
aaacgcaagatgatgctcacccacctggtggtgcgacctggcctgggctccaagtcgggc
tccatgaccaagcaggaactggatgacatcctcaagttcgggacagaggagcttttcaag
gatgatgtggaaggcatgatgtcccagggccagaggcctaccacacccatccctgacgta
cagtccaccaagggcggatccctggctgccggggcaaagaaaaagcacggcagcaccccg
ccaggtgataacaaagatgtagaagacagcagtgtgatccactatgacgacgcagccata
tccaagctgctggatcggaaccaggatgccacggatgacaccgagctgcagaacatgaac
gagtacctgagctccttcaaggtggcacagtatgtggtccgtgaggaagatggcgtggag
gaagtagagagggaggtgatcaagcaggaggagaacgtggaccctgactactgggagaag
ctattgcgccatcactatgaacagcaacaagaggacttggcccgcaacctgggcaagggc
aagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccagggtgcgtgt
gagtggcaggatgagctctcagacaaccagtcagaatattccatcggctctgaggatgag
gacgaggacttcgaggagaggccggaagggcagagtggaagacgacaatccaggagacag
ctgaagagtgacagggacaagcccctgccgcctctgctggctcgggttgggggcaacatt
gaggttctgggcttcaatgccagacagaggaaggcttttttgaatgccatcatgcgctgg
ggcatgcctcctcaggatgccttcaactcccactggctggtgcgggaccttcgtgggaag
agcgagaaggaatttagggcctatgtatcactcttcatgcgccacctgtgtgagccgggc
gcagacggcgctgagaccttcgcagatggtgtgccccgggagggcctgtccaggcagcac
gtgctcacacgtattggggtcatgtcgctggttaggaagaaggtgcaggagtttgaacat
gtcaacggcaaatacagcactccagacctggtccctgagggacccgagggcaagaagcca
ggcgaggtcatctcctcagaccccaacacacccgtgcctgccagcccggcacagcttgca
ccggctccactgggcctgccagacaaaatggaagccccgctgggctacatggacgagaag
gagtcaggcatgcagaagccaaagaagtccctggaaatccaggccccgcccactgccctg
gacaagatagagggtgaagacaggcagcagagctcggacagcaaggacagggctcgggag
gagagaatggaagaggtggagaaggcccagggctctccggagcagccactgaaagaggaa
gtgctgccggacaaggagccgatcccagataagctggagctgagcctgggtcacagcggc
gatttcaggccagatgaccccaaggctgaggagaaggagcccatggagactcagcagaac
ggcgacagagaggaagatgaggagagcaagaaagaagacaagaatgggaaattcaaattc
atgttcaacattgcagatggcggtttcacagagctgcacactctgtggcagaatgaggaa
cgggcggctgtgtcctccgggaaaatctatgaaatctggcaccggcgtcatgactactgg
ctgctggcaggcatcgtgacgcatggctatgcccgctggcaggacattcagaatgacccg
agatacatgatcctaaatgagcctttcaagtctgagatccacaagggcaactacctggag
atgaagaacaagtttttggcccgtaggttcaagctgctggagcaggccctggtgatcgag
gagcagctccggagggcagcgtacctcaacatgacccaggatcccaaccacccagccatg
gcgctcaatgctcgcttggcagaggtggagtgccttgccgagagccaccagcacctatcc
aaggagtccctcgccgggaacaagcctgccaatgctgtcctgcacaaggtcctgaaccag
ctggaggagctgctgagtgacatgaaagcagatgtgacacgcttgccctccatgttgtca
cgcatccccccggtggccgcccgcctgcagatgtctgaacgcagcatcctgagtcgcctg
accaaccgtgccggtgaccccaccatccagcagggcgctttcggctcctctcagatgtac
aacaacagctttgggcccaacttccggggccctggaccgggagggattgtcaactacaac
cagatgcccctggggccctatgtgactgacatctag
DBGET
integrated database retrieval system
