Mastomys coucha (southern multimammate mouse): 116097098
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Entry
116097098 CDS
T07224
Symbol
Nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcoc03037
]
116097098 (Nphp4)
Cilium and associated proteins [BR:
mcoc03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
116097098 (Nphp4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
NPHP4_C2_2nd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
116097098
NCBI-ProteinID:
XP_031235493
LinkDB
All DBs
Position
Unknown
AA seq
1431 aa
AA seq
DB search
MGSMDDWHRVFTQNTLVPPHPQRVRQLGKESTAFQCILKWLDGPLIKQGILDMLSELECH
LRVSLFDVTYKHFFGRTWKTTVKPTNQLSKQPPRIIFNEPLYFHTTLSHPSIVAVVEVVT
EGRKRDGTLQLLSCGFGILRIFGNKPESPTSAAQDKRLRLYHGTPRALLHPLLQDPIEQN
KYLTLMETCSLQYTLKPHPALEPAFHLLPENLLVSGFQPIPGLLPSHSSDTGDTLRKPRF
QKPTTWHLDDLFFTLYPSLEKFEEELVQLLISDRFREGVGMLDSGTLEVLERRLHVCVHN
GLGFVHRPQVVVLVPEMDVALTRSASFSRRISASSKNSSGNQALVLRSHLRLPEMVSHPA
FAIVFQLEYVFNSPSGADGSASTSTSVSSLACMHMVRWAVWNPSLEAAPGKVTLPLQGGV
QHNPSRCLVYKVPSASMSSEEVKQVESGTIQFQFSLSSDAPTEHANGPRAGRRSSRKMPV
SPSGTPAPAARDLAAIQDSPVGPGLSLSQLVASPPSPALRSSSKPPPQPPDSSQSPEGPQ
LQAESVLESRISHLEADLSQPPSLQGAPAMEHLQELPFTPLHAPIVVGAQTRSSRSQLSR
AAMVLLQSSGFPEILDARQQPVEAVNPIDPVRFNPQKEESDCLRGNEIVLQFLAFSRAAQ
DCPGAPWPQTVYFTFQFYRFPPETTPRLQLVKLDGIGKSSSGSLSHILVLINKDGSFDAG
SPGFQLRYMVDPEFLKPGEQRWFAHYLAAQTLQVDVWDGDSLLLIGSAGIQMKHLLRQGR
PAIQVSHELEVVATEYEQEMMAVSGDVAGFGSVKPIGVHTVVKGRLHLTLANVGHACEPR
ARGSNLLPPSRSRVISNEGASIFSGGSLLTPGGPRRKRVVQAQKLADVDSELAAMLLTHM
RAGQGPQAAGQEADAVHKRKLERMRLVRLQEAGGDSDSRRISVLAQHSVRAQHSRDLQVI
DAYRERTKAESIAGVLSQAITTHHTLYATLGTAEFFEFALKNPHNTQHTVAIEIDSPELS
IILDSQEWRYFKEATGLHTPLEEDMFHLRGNLAPQLYLRPRETAHIPLKFQSFSVGSLAP
TQAPAEMILERDTESGPLWKGSAMPTKHTKVLFRVETGQLIAVLCLTVEPQPHVVDQVFR
FYHPELTFLKKAIRLPPWHTLPGAPVGMPGEDPPVHVRCSDPNVICEAQNVGPGEPRDVF
LKVASGPSPEIKDFFVIIYVDRWLAVPVQTWQVCLHSLQRVDVSCVAGQLTRLSLVLRGT
QTVRKVRAFTSHPQELKTDPAGVFVLPPHGVQDLHVGVRPRRAGSRFVHLNLVDVDYHQL
VASWLVCLSCRQPLISKAFEITMAAGDTKGANKRITYTNPYPSQRTYRLHSDRPDLLHFK
EDSFQVAGGETYTIGLRFLPSGSAGQEEILIHINDHEDKNEETFCVKVLYQ
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcatggatgactggcacagagtcttcacccagaacacactggtccctccccac
ccacagagagtgcggcagcttgggaaggagtctacggcattccagtgcatcctgaagtgg
cttgacgggccactcatcaagcagggaatcctagacatgctgtccgagcttgaatgccat
ctgcgagtgtccctcttcgatgtcacctacaaacatttctttgggaggacgtggaaaacc
acagtgaagcccaccaatcaactctctaagcagccacccaggatcatcttcaatgagccc
ttgtacttccacaccaccttgagccaccccagcatcgtggctgtggtcgaagtggtcacc
gaaggcaggaaaagggatggcaccctgcagctgctgtcctgtgggtttggaattcttcgc
atctttggcaataagccagaatctcccacctctgcagcccaggacaaacggttgaggctg
tatcatggcaccccaagagctctcctgcacccacttctccaggatcccatagaacagaac
aagtacctgacgctgatggagacctgtagcctgcagtacaccctgaagccacacccagcc
ctagagcctgccttccacctgcttcctgagaacctcctggtgtctggtttccagcccatc
ccgggcctcctccccagtcacagcagcgacacaggtgacaccctgcggaagcctcgcttc
cagaagcccaccacgtggcacttagatgacctcttcttcaccctgtacccctccctggag
aagtttgaggaggaacttgtgcagctgctcatcagcgaccgcttccgggagggggttggc
atgctggacagcggcaccttagaggtcctggagcggcgcctgcacgtctgtgtccacaac
gggctgggcttcgtgcacaggccacaggtggttgtgcttgtacctgagatggacgtggcc
ttgacacgctcggccagcttcagcaggagaatcagtgcctcttctaagaacagctccgga
aatcaggctctagttttgagaagccacctgcggctcccagagatggtcagtcacccagcc
tttgccatcgtcttccagctggagtatgtgttcaacagcccctcaggagcggatggcagc
gccagcacgtctacctcagtgtccagcttggcgtgcatgcacatggttcgatgggctgtt
tggaacccaagtctggaagcggccccaggaaaggtgacactgcctcttcagggcggggta
cagcacaacccctctcgctgtctggtctataaggtgccttcagctagcatgagctccgag
gaggtgaagcaggtggagtccggaaccatccagttccagttctcactgagctcagatgcc
cccacagagcatgccaacggccccagggcagggcggcgttcctccaggaagatgccagtg
tccccttcaggcacaccagcaccagcagcccgggatcttgctgcaattcaggactctcct
gttggcccagggctctcgctctcccagctggtggcctcccctccgtctccagctctgcga
agctcttccaagccccctcctcagcccccggacagctctcagtccccagagggtccccag
ctccaggccgaatctgtactagagagcaggatctctcacctggaagccgacctgagccag
ccgccctcgctccagggagcgcctgctatggaacatctacaggagctgcccttcactcct
ctgcacgcccccattgttgtgggagcccagaccaggagctctagaagccagctctccaga
gctgcgatggtgctcctgcagtcttccggcttcccggagatccttgatgccaggcagcag
ccagtggaagccgtcaatcccatagatcctgtgaggttcaaccctcagaaggaggagtcg
gactgtcttcgagggaatgagatagtgctgcagtttcttgccttcagcagagcggcccag
gactgcccaggagcgccgtggccacagactgtgtatttcaccttccagttctaccgtttc
ccacccgagaccacgccgcgcctgcagctggtcaagctggatgggataggcaagagcagc
tctggctccctgtcccacatccttgtcctcattaataaagatggctccttcgatgctggc
tcccctggcttccagctgaggtacatggtggatcccgagttcctgaagccaggagaacaa
cgctggttcgcccactacctggctgctcagacgctgcaggtcgacgtctgggatggagac
tccttgctcctcattgggtctgccggcatccagatgaagcacctcctccgccaagggcgg
ccagctattcaggtctcacatgaactggaggtcgtggccactgagtacgaacaggaaatg
atggcggtgagcggcgatgtggctggctttggcagcgtcaagcccattggagtccacacg
gtagtgaagggccggctgcacctgaccttggccaacgtgggtcatgcgtgtgagccgaga
gcaagaggttccaacttactgccaccatccagatctcgggtcatctcaaatgaaggagcc
agcatcttctctgggggaagcctcctcacaccaggaggccccaggcgaaagcgagtggtc
caagctcagaagctggcggatgtggacagtgagctggccgccatgctgctgacccacatg
cgagctggccaggggccccaggctgcaggccaggaggcagatgctgtccacaagcggaag
ctggaaaggatgcggctggtgcgcctgcaggaggcgggaggggactctgacagccgcagg
atcagtgtgctggcccaacacagcgtccgtgcacagcactcacgggacctgcaggtcatt
gatgcctaccgggaacgtaccaaggctgagagcattgccggagtgctgagccaggccatc
accacccaccacacactgtacgccacactgggcactgctgagttctttgagtttgcactt
aaaaacccacacaacactcagcacacggtggccatcgagattgacagccctgagctcagc
atcatcctggatagccaggagtggaggtacttcaaggaggccaccggcctgcacacgccg
ctggaggaggacatgttccacctgcgtgggaacctggcaccccagctttacctgagaccc
cgggagactgcccacatccccctcaagttccagagcttctctgtgggctcactcgctcca
acacaggcccctgctgagatgatcttagagagggacacagagtctggacccctttggaag
ggcagtgccatgcctacaaaacacaccaaggtccttttccgggtggagactggccagctc
attgctgtgctctgcctgaccgtggagccccagccgcacgtggtggaccaggttttccgt
ttctaccacccagaactcaccttcctgaagaaggccatccgcctgcctccctggcacacg
cttccaggtgctccggtggggatgcctggcgaggaccccccagtccacgtccgatgcagt
gacccgaatgttatctgtgaggcccagaacgtgggccctggtgagccgagggatgtgttc
cttaaggtggccagcggtccaagccctgagatcaaagacttctttgtcatcatctatgtg
gatcgctggctggcggtgcctgtgcagacatggcaggtctgcctccactccctgcagcgc
gtggacgtttcctgtgtcgcaggacagctgacccgtctgtccctcgtcctacgggggaca
cagaccgttaggaaagtgagagctttcacctcccaccctcaggagctgaagacagaccct
gccggtgtctttgtgttgccacctcatggggtacaggacctgcacgtgggcgtgaggccg
aggagggctggcagccgctttgtccatctcaacctggtggacgtagactaccaccagctg
gttgcgtcatggctcgtgtgcctctcctgccgccagccactcatttccaaggcctttgag
atcaccatggcagcaggggacacgaagggggccaacaagcggatcacctacaccaacccc
tacccttctcagagaacctatcgtctgcacagtgaccgccctgacctgctgcacttcaag
gaggactccttccaggtggcgggaggagagacctacaccatcggcctgcggttcctacca
agtggcagcgccggacaggaggagatcctcatccacatcaatgaccatgaggacaagaat
gaagagacattctgtgtgaaggtcctctaccagtga
DBGET
integrated database retrieval system
