Mastomys coucha (southern multimammate mouse): 116097475
Help
Entry
116097475 CDS
T07224
Symbol
Abcb4
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc02010
ABC transporters
mcoc04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
116097475 (Abcb4)
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
116097475 (Abcb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcoc02000
]
116097475 (Abcb4)
Enzymes [BR:
mcoc01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
116097475 (Abcb4)
Transporters [BR:
mcoc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
116097475 (Abcb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
AAA_5
Zeta_toxin
AAA
G-alpha
AAA_29
AAA_7
SbcC_Walker_B
APS_kinase
nSTAND1
DUF815
NTPase_1
Motif
Other DBs
NCBI-GeneID:
116097475
NCBI-ProteinID:
XP_031235861
LinkDB
All DBs
Position
Unknown
AA seq
1278 aa
AA seq
DB search
MDLETARNGTARRLDGDFELGSISNQGREKKKKVNLIGLLTLFRYSDWQDKLFMFLGTLM
AIAHGSGLPLMMIVFGEMTDKFVDNTGNFSLPVNFSLSMLNPGRILEEEMTRYAYYYSGL
GAGVLVAAYIQVSFWTLAAGRQIKKIRQNFFHAILRQEMGWFDIKGTTELNTRLTDDISK
ISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLSTAVWAKILSTFSD
KELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANISMGI
AFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGA
AYVIFDIIDNNPKIDSFSERGHKPDSIKGNLEFSDVHFSYPSRANIKILKGLNLKVKSGQ
TVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRCLREIIGVVSQEPVLFS
TTIAENIRYGRGNVTMEEIKKAVKEANAYDFIMRLPQKFDTLVGDRGAQLSGGQKQRIAI
ARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGF
EDGVIVEQGSHSELMKKEGIYFRLVNMQTSGSQTLSEEFEVELRDEKAAGGVAPNGWKAH
IFRNSTKKSLKGSRAHQNRLKEESNEPDANVPPVSFLKVLKLNKTEWPYFVVGTVCAIAN
GALQPAFSIILSEMIAIFGPGDDTVKQQKCNMFSLVFLGLGVLSFFTFFLQGFTFGKAGE
ILTTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQGATGTRLALIAQNTAN
LGTGIIISFIYGWQLTLLLLSVVPFIAVAGIVEMKMLAGNAKRDKKEMEAAGKIATEAIE
NIRTVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFGSY
LIVNGHMRFKDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAYLFSLFERRPLIDSYS
GEGLWPDKFEGSVTFNEVVFNYPTRANVPVLQGLSLKVKKGQTLALVGSSGCGKSTVVQL
LERFYDPMAGSVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSH
EEIVRAAKEANIHPFIETLPQKYNTRVGDKGTQLSGGQKQRIAIARALIRQPRVLLLDEA
TSALDTESEKVVQEALDKAREGRTCIVITHRLSTIQNADVIVVIQNGKVKEQGTHQQLLA
QKGIYFSMVNIQAGTQNL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgagacagcgagaaacggaacagcgcggcgcctggacggcgactttgaacta
ggcagcatcagcaaccaaggcagagaaaaaaagaagaaagtgaatttaattggcctgttg
acactgttccgatactctgactggcaggataaattgtttatgttcctgggcaccctcatg
gccatagctcatggatcaggtcttcccctcatgatgatagtctttggagaaatgacagat
aagtttgtagataatactgggaacttctccttgccagtgaatttttcattgtcaatgcta
aatccaggaagaattctggaagaagaaatgactagatatgcatactactattcgggacta
ggtgctggagttcttgtggctgcctatatccaagtctcattctggactttggcagctggc
cgacaaataaagaaaatcaggcaaaatttttttcatgccatcctccgacaagaaatgggc
tggtttgacatcaaaggcaccactgaactcaacacacggctgacagatgacatctccaaa
atcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagccacgtttttt
gcaggattcatagtggggttcatcagaggatggaagctcacccttgtgatcatggccatc
agccccattctggggctctctacagctgtttgggcaaagatactctccacgttcagtgac
aaagaactagctgcgtatgcaaaagcaggtgccgtggctgaagaggctttgggggccatc
aggactgtgatagctttcgggggccaaaacaaagagctagaaaggtatcagaaacattta
gaaaatgccaaaaagattggaattaaaaaggctatctcagccaacatctctatgggcatt
gccttcttgttaatctatgcatcctatgcactagccttctggtatggatccactctggtt
atatcaaaagaatatacaattggaaatgcaatgacagtcttcttttcaatcctcattggg
gctttcagtgtggggcaagctgccccctgtattgatgcttttgccaatgcaagaggagcg
gcctatgtgatctttgacattattgataataatcctaaaattgacagtttttcagagaga
ggacacaaaccagacagcatcaaaggaaatctggagttcagcgatgttcacttctcctat
ccatctcgagctaatatcaagatcttgaagggcctcaacctgaaggtgaagagcggacag
acggtggccctggttggcaacagtggctgtgggaaaagcacaactgtccagctgctgcag
aggctctacgaccccacagagggtacgattagcattgacgggcaggacatccggaacttt
aacgtcaggtgtctgagagaaatcattggtgtggtaagtcaagagccagtactgttctct
accacgatcgctgaaaatatccgctacggccgtggtaacgtaacgatggaggagataaag
aaagctgtcaaagaggccaatgcctacgacttcatcatgagactgcctcagaaatttgac
accctggttggtgatagaggagcgcagctgagtgggggacagaaacagagaatcgccatt
gcccgggccctggtccgcaaccccaagatcctcctgctggacgaggccacctcggccctg
gatacagaaagtgaagctgaggtgcaggccgctctggataaggccagagaaggccgaacc
accattgtgatagctcaccgattgtctacagtccgaaacgcagatgtcatcgctgggttt
gaggatggagtcatcgtggaacaaggaagtcacagtgagctgatgaagaaggaagggatc
tatttcagacttgttaacatgcagacatcaggaagccagaccctgtcagaagaatttgaa
gttgagctaagagacgaaaaggctgctggaggtgtggccccaaacggctggaaagcacac
atatttaggaattctacaaagaaaagtcttaaaggttcacgagcacatcagaataggctg
aaggaagaaagcaatgaacctgatgcaaacgtgccaccggtgtcttttctgaaggtctta
aaactgaataaaacagagtggccctactttgtggtgggaacagtctgtgccattgccaac
ggggccctccagccagctttctccatcatcctgtcagagatgatagctatcttcggccct
ggggatgacacagtgaaacaacagaagtgtaacatgttctcgctggtcttcttgggccta
ggagtcctctccttctttactttcttccttcagggcttcacatttgggaaagctggagag
atcctcaccacaaggctccggtccatggcctttaaagccatgctaaggcaggacatgagc
tggtttgatgatcataaaaacagtactggtgcactttccacaaggctcgccacagatgct
gcgcaagtccaaggagccacgggaaccaggttggctttaatcgcacagaacacagccaac
cttggaaccggtattatcatatcatttatttacggttggcaactgacacttctgctgtta
tcggttgttccattcattgctgtagcaggaattgttgaaatgaaaatgttggctggcaat
gccaagagagataaaaaggaaatggaagctgctggaaagattgcaacagaggcaatagaa
aatattcggactgttgtatccttgacccaagaaagaaaatttgaatcaatgtatgttgaa
aaattgcatggaccttacaggaattcagtgcggaaggcacacatctacggcatcaccttt
agcatctcgcaagcattcatgtatttttcttatgctggctgttttcgatttggttcttac
ctaattgtgaatggacatatgcgcttcaaagacgtcattctggtgttttccgcaattgtg
cttggcgctgtggctctaggacacgccagttcatttgctccagactatgcaaaagccaag
ttgtctgcagcgtacttgttcagcctgtttgaaagacgacctctgattgacagctacagt
ggagaagggctgtggcctgataagtttgaaggaagcgtgacgtttaatgaagtcgtgttc
aactatcccacccgagccaatgtgccagtgcttcaggggctgagcctcaaagtgaaaaag
ggccagacgctggccctggtgggcagcagtggctgcgggaagagcacagtggtccagctg
ctcgagcgcttctatgaccccatggctggatcagtgctcctagatggtcaagaagcaaag
aaactcaatgtccagtggcttcgagctcaactgggcattgtgtcccaggagcccatcctg
tttgactgcagcatcgcagagaacatcgcctatggagacaacagccgggtcgtgtctcat
gaggagattgtgagggcagccaaggaggccaacatccaccccttcattgagacactgccc
caaaaatataacacaagagtaggggacaaggggacacagctctctggaggccagaagcag
aggattgccattgcccgagccctcatcagacagcctcgggtcctgctgctggatgaagcc
acgtcggctctggatactgagagtgaaaaggttgtccaggaagcgctggacaaagccagg
gaaggccgcacctgcattgtgatcacgcaccgcctgtccaccatccagaacgcagacgtg
atcgtggtgattcagaacggcaaggtcaaggagcagggcacccaccagcagctgctggca
cagaagggcatctatttctcaatggtcaacattcaggccggcacacagaacttatga
DBGET
integrated database retrieval system
