Mastomys coucha (southern multimammate mouse): 116097548
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Entry
116097548 CDS
T07224
Symbol
Clasp1
Name
(RefSeq) CLIP-associating protein 1 isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116097548 (Clasp1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116097548 (Clasp1)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
116097548 (Clasp1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
116097548 (Clasp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Sec7-like_HUS
Cnd1
HEAT_2
RTP1_C1
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
116097548
NCBI-ProteinID:
XP_031236015
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MEPRMESCLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQTLLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGICLCLIATLNASGAQTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANEKN
FDDEDSVDGNRPSSASSSSSKAPSSSRRNVSLGTTRRLMSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALRKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHNHFSREAEHLYHTLESSYQKALQSHL
KNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTASRGSTVSTKSVSTTGSLQRSRS
DIDVNAAASAKSKVSSSSGSTAFSSAAALPPGSYASLESRHMREDLEYIGLDAGRIRTRR
QSSGSTTNVASTPSDSRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSGCGGLTGG
SSRGPPVTPSSEKRSKIPRSQGCSRETSPNRIGLASRRHSRSTSALSTAESGGQSDRFGL
GQSGRIPGSVNAMRVLSTSTDLEAAVADALLLGDTRSKKKPVRRRYEPYGMYSDDDANSD
ASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRTLS
RVELKRLCEIFTRMFADPHSKIADSEAECEDKEGNLFPSEGSCPRVFSMFLETLVDFIII
HKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQT
QTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVL
ISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNAGVGSPSNTIGRTPSRHPSSR
TSPLTSPTNCSHGGLSPSRLWGWSADGLSKPPPPFSQPNSIPTAPSHKTLRRSYSPSMLD
YDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNEPIKRDGKKDCDLVSRDGGAASPATE
GRGGSEVEGGRMALDNKTSLLNTQPPRAFPGPRAREYNPYPYSDTINTYDKTALKEAVFD
DDMEQLRDVPIDHSDLVADLLKELSNHNERVEERKGALLELLKITREDSLGVWEEHFKTI
LLLLLETLGDKDHSIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAA
EEAASTLASSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVVERITKESLLQLLVDIIP
GLLQGYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSN
SSSSSDVSTHS
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggaacctcgaatggagtcctgtctggcccaggtgctgcagaaggatgtggggaagcgg
ctgcaggttggccaggaactcatagactatttctcagacaaacagaagtctgctgacctt
gagcatgaccagaccatgttagataagcttgtggacggactcgctacctcttgggtgaac
tctagcaattacaaggtggttctcttgggcatggacatcctgtcggcgctggtgactagg
ctgcaggaccggttcaaggcgcaaatcggcacagtgttgccaagtctaatagacagactg
ggagatgctaaagactccgtgagggagcaagaccaaaccctgctgctaaagatcatggat
caagctgctaatccccagtatgtatgggacagaatgctcggaggcttcaaacacaagaac
ttccgcacaagagagggcatctgcctctgccttattgcaaccctcaatgcctctggggcc
cagactctaacactaagcaagatcgtgccacatatatgtaacctactgggagatcccaac
agccaggttcgagacgcggcaatcaacagtctggtggagatttatagacatgtaggcgaa
cgcgtgagggcagacctcagcaagaagggactcccacagtcccggttgaacgtcattttt
acaaaatttgatgaagtccaaaagtctggaaatatgatacagtctgcaaatgaaaaaaat
tttgatgatgaagattctgtggatggcaacaggccttcttctgccagctcctcgtcatcc
aaggctccatcaagttcccggaggaatgttagcctggggaccacccgtaggctcatgtca
tccagtcttggatctaagtcttcagctgcaaaagaaggtgccggtgctgtggatgaagag
gattttattaaggcctttgatgacgtacctgtagtgcagatttactccagcagagacctt
gaggaatccataaacaaaattagagaaattctatcagatgacaagcatgactgggagcag
agagtaaacgctctaagaaagatcaggtcgttactcttggctggcgctgctgagtacgac
aacttctttcaacacttgcgtcttctggacggagcctttaagctctctgctaaggacctg
cggtctcaggtagtgcgggaagcttgtatcacactggggcacctgtcatcagttctggga
aataagtttgatcatggagctgaagccatcatgccaactatctttaatttaatcccaaac
agtgccaaaattatggctacttctggtgttgtagctgtcaggctaatcattcggcacact
cacatccctcggctgatccctgtcataaccagcaactgtacctctaagtctgtcgcggtc
agaaggcgctgttttgaatttttagatttgcttttacaagaatggcagacgcattcacta
gaaagacacatatcagtattagctgaaacaataaagaaaggaatacacgacgctgattct
gaagcaaggatagaagccaggaaatgctactggggtttccacaatcacttcagccgagaa
gcagaacacctgtaccacactttggagtcctcctaccagaaggccctacagtcccacttg
aagaactcggacagcatcgtgtctctaccccagtcagaccgatcctcttccagctctcaa
gagagtctcaaccggccgctttcagccaaaagaagtcccactggcagcactgcatccaga
ggctctacagttagtacaaaatctgtgtcgacgacaggctctctccaacgatctcgaagt
gatattgatgtgaatgcagcagccagtgccaaatccaaagtctcctcatcctcaggatcc
actgccttcagctctgcagcagcgctgcctccaggatcctacgcatccttagagtccaga
cacatgagggaagacttggagtacataggcctggatgcaggtcggatccgcacgagacgg
cagagctccgggagcaccaccaatgttgcctccacaccctccgacagcaggggccgcagt
cgcgccaaagtggtttcccagtctcagcgatccagatctgctaaccctgctggtgctggc
agccggtcaagttcccctgggaagcttttgggaagtggatgtggaggacttactgggggt
tcctcaagaggcccaccggtaacaccatcttcagaaaaacgaagcaagatccccaggagt
cagggatgtagccgagaaacaagtcctaaccggattggattagcctctcgacgtcattcc
aggtccactagtgctctctccactgctgaatctggtgggcagtcagatcggtttgggctg
ggccagtccggacggatccccggttctgtgaacgccatgcgagtcttgagtaccagcacc
gacctggaagccgcagtggctgatgctctgctgttaggagacaccaggagcaagaagaag
cctgtgagaaggaggtacgagccctatggaatgtattccgatgatgatgccaacagtgat
gcctcaagcgtgtgctctgagcgctcatatggctccaggaatggcggcattccccattat
ctgcggcagactgaagatgtagcagaggttctcaaccactgtgccagttctaactggtca
gaacggaaagaggggctcctgggcctgcagaacttactgaagagccaaagaacactgagt
cgagtagaattgaagaggctgtgtgagattttcacacgaatgtttgccgaccctcacagc
aagattgctgattcagaagcagaatgtgaggataaagaaggaaatttgtttccatcagaa
ggctcttgtccaagagttttcagtatgtttttggagaccctcgtggacttcatcatcatt
cataaggatgacttgcaagactggctcttcgtccttctcacacaactactgaagaaaatg
ggagcagacttacttggatctgtgcaagctaaagttcagaaggctctagatgtcaccagg
gattcctttccattcgaccaacaatttaatattttgatgagatttattgtggatcagact
caaactccaaacctcaaggtcaaagtggcaatcctgaagtacatcgagtctctggccaga
cagatggaccccacagattttgtaaattccagcgagacaaggcttgctgtttctaggatc
ataacatggactacagaaccaaagagttcagacgtgaggaaggcagcgcaggttgtgctc
atctcactgtttgaactgaacactcctgaatttaccatgttacttggtgccttgccaaaa
acattccaggatggtgccaccaaactcctgcataaccacctcaagaactccagtaatgcc
ggtgtgggatctccaagcaatacaattggccggacaccttcccgccaccccagcagcagg
accagccccctgacatcacccaccaactgttcccatgggggactatctccaagtcggttg
tggggttggagtgccgacgggctatcgaagcccccacctcccttttctcagcctaactcc
attcccaccgctccctcccacaagactctcaggcgttcttactctcccagcatgctggac
tatgatacagagaacctgaactctgaagaaatctacagctctttgcgtggagttacagaa
gccattgaaaagttcagcttccggagccaggaggatctaaatgagccaatcaaacgagat
ggcaagaaggattgtgatcttgtgtcccgagatgggggagcagcctcacctgccacggag
ggccggggaggtagtgaggtagaaggaggcaggatggctttggacaacaagacctccctg
ctcaacacgcagcctccacgtgcctttccggggccaagagcacgggaatacaacccatac
ccctactccgacaccatcaatacctatgataagacggctctgaaggaagcggtgtttgac
gatgacatggagcagctccgagatgtacccattgaccactcggacctggtggctgacttg
ctgaaagagctatctaaccacaacgagcgcgtggaggagcggaagggcgcgctgctggag
ctgctcaagatcaccagggaggatagcctgggcgtgtgggaggagcacttcaagaccatc
ctgctgctgctgctggagacactcggagacaaagaccattccattcgagctctggcactg
agagttttacgggagattctgagaaaccagccagcaagattcaaaaactacgcagaactg
acgatcatgaagactctggaagcccacaaagactcccacaaggaggtggtgagagcagct
gaggaggctgcatccacgctagccagctcaatccaccctgagcagtgcatcaaagtgctg
tgtccaatcatccagacggccgactaccccatcaacctggctgccatcaagatgcagaca
aaggtggtagagaggatcaccaaggagtccctgctgcagctcctcgtcgacatcatcccc
ggcctgctgcagggttacgacaacaccgagagcagtgtacggaaagccagtgtgttttgc
ttagtggcaatctattccgtaatcggagaagatctgaaacctcacctcgcacagctcacg
gggagcaagatgaagctgctgaacttatatataaagagggcccagaccaccaacagcaac
agcagctcctcctctgatgtgtccacacacagctag
DBGET
integrated database retrieval system
