Mastomys coucha (southern multimammate mouse): 116097560
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Entry
116097560 CDS
T07224
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03082
ATP-dependent chromatin remodeling
mcoc04714
Thermogenesis
mcoc05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116097560 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
116097560 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
116097560 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcoc03021
]
116097560 (Smarcd3)
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116097560 (Smarcd3)
Transcription machinery [BR:
mcoc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116097560 (Smarcd3)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116097560 (Smarcd3)
PBAF complex
116097560 (Smarcd3)
GBAF(ncBAF) complex
116097560 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
116097560
NCBI-ProteinID:
XP_031236045
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDVRPGPVPVTFLQPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHR
TPTTQETDGFQVKRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALW
QYVKTNRLQDSHDKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVD
PSDQKKTACYDIDVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDF
MLSFSRDPKGYVQDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQ
QRRQELEQSLVVRNT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgcggtacgacccggcctg
gcccctgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccaa
gcacagggccagggccagcccgtgcccaccgccccagcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccccgagtcccag
gcttacatggacctcctagcatttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacttttaaccctgcgaagcccgatgccgaagattctgatggcagcattgcc
tcctgggagctgcgggtagaggggaagctcttggatgatgtacgtcctggcccagtccct
gtcactttcctacagcccagtaagcagaagaggaagttttcttccttcttcaagagtttg
gtcattgagttggacaaagacctttatggccccgacaaccaccttgttgagtggcaccgg
acaccaacaacccaggagacagatgggttccaagtgaagagaccaggggacttaagtgtg
cgctgcaccctgctcctgatgctggactatcagcctccccagttcaaactggacccccgc
ttagccaggctgctgggattgcatacacagagccgctcagccattgtccaggcactgtgg
cagtatgtgaagaccaacaggctacaggactcccatgacaaggaatacatcaatggagac
aagtatttccagcagatttttgactgtccccgcctgaagttttctgagattccccagcgc
ctcacagccctgctgctgccccctgacccaattgtgatcaaccatgtcatcagcgtggac
ccatcagaccagaagaagacagcgtgctatgacattgacgtggaggtggaggaaccactg
aaggggcagatgagcagcttcctcctgtccacggccaaccagcaggagatcagtgctctg
gacagtaagatccatgagacgattgagtccataaaccagctcaagatccagagggacttc
atgctaagtttctccagagaccccaaaggctatgtccaagacctgctccgctcccagagc
cgtgatctcaaggtgatgacagatgtggccggtaaccctgaggaagaacgcagggctgag
ttctaccaccagccctggtcccaggaagccgtcagccgctacttctactgtaagatccag
cagcgcaggcaggagctggagcagtcgctggtcgtgcgcaacacctag
DBGET
integrated database retrieval system
