Mastomys coucha (southern multimammate mouse): 116097610
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Entry
116097610 CDS
T07224
Symbol
Pex1
Name
(RefSeq) peroxisome biogenesis factor 1
KO
K13338
peroxin-1
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
116097610 (Pex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116097610 (Pex1)
Membrane trafficking [BR:
mcoc04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
116097610 (Pex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-2N
PEX-1N
AAA_16
AAA_lid_3
AAA_14
nSTAND3
RuvB_N
TIP49
ABC_tran
AAA_22
AAA_33
AAA_19
RNA_helicase
Sigma54_activ_2
AAA_5
AAA_18
Sigma54_activat
AAA_29
Mg_chelatase
AAA_7
DUF815
AAA_2
IstB_IS21
T2SSE
CobU
FtsK_SpoIIIE
AAA_23
Motif
Other DBs
NCBI-GeneID:
116097610
NCBI-ProteinID:
XP_031236141
LinkDB
All DBs
Position
Unknown
AA seq
1241 aa
AA seq
DB search
MWSSDRLAGAGSGGAVVTLAFTNARDCFLHLPRRLVAQLHLLQNQAIEVASDHQPTYLSW
VEGRHFKDQSENVAEINRQVGQKLGLSSGDQVFLRPCSHVVSCQQVEVEPLSADDWEILE
LHAISLEQHLLDQIRIVFPKAVVPIWVDQQTYIFIQIVALIPAAPYGRLETNTKLLIQPK
TRQAKENTFPKEGNAQGQVRSYGREQKRLSKELQTKQLHMDTEDVTGSNGREPDVPGDLS
KPRWWAMLGSMFAFGPDHKQELAWGSLELRAFRTMQSQAVPLDNIFRVCQVQPPSVCNTP
TTSVFHKHCTIHVFPWDQEYFDAEPSFTVIYGKLVKLHSPKQQQDRSKQGVLLPEKEKQL
PESPDHKQIGSDRSEDAAEACVLKVVWNGLEELKSAAEFTRSLEPLHHGKVWIPDDLRKR
LNIEMHAVVRITPLETMPKIPRSLKLQPRENLPKDVSEEDVKTVFSSWLRQSATTMLPLV
ISKEACIKLEIKDGLKEFSLSIVHPQEKEKEQGKTVFVLSSILLQKISVQVLLEPMIREE
PNVEIDSLLPCLALSFLGGVSSLGISAMEHITHSLLGRPLSRQLMALVAGLRNGALLITG
GKGSGKSTFAKAICKEAHDLLDAHMEIVDCKALRGKRLERIKKALEVAFSEAAWRQPSVI
LLDDLDLIAGLPSIPEHEHSPEAVQGQRLAHALNDMIKEFVSMGSLVALVATSQLQHSLH
PSLVSAQGIHTFQCVQHIQPPSQEQRCEILHSVVKNKLGCDISKSPDLDLQLIAKETETF
VAQDFTVLVDRAIHSSLSRQHSSTREELTLTTSDFQKALCGFLPASLRNVNLHKPRDLGW
DKIGGLHEVRQILMDTVQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESG
MNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDR
VVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPESFTGADLKALLYNAQLEALQGR
LLPRGPLDGGSSSDSDLSLSSMVFLNHSSGSDDSAGDGECGLDQSLVSLEMSEILPDESK
FNMYRLYFGSSYESELGNGTSSDLSSHCLSAPSSITQDLPAAPGKDPLFTQHSVFRTPSQ
EGCQDLTQEQRDQLRADISIIKGRYRSQSGEDESLNQPGPIKTSFAISQAHLMTALAHTR
PSISEDEGKEFAELYENFQNPKKRKNQSGTVFRTGQKVTLA
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcagcgatcgcttagccggtgcggggtctggtggggcggtcgtgacgttggcc
ttcacgaacgctcgggactgcttcctgcatctgccgcggcgcctcgtggcccagcttcac
ctgctgcagaatcaagctatagaagttgccagtgatcaccagcccacctacctgagctgg
gtggaaggcaggcattttaaagatcaaagtgaaaatgtggcagaaattaatagacaagtt
ggccagaaacttggactttcgagcggggatcaggtgtttctcaggccttgttcccacgtg
gtatcttgccaacaggttgaggtggagcctctctcagcagacgactgggaaatactggag
ctgcacgccatttcccttgaacagcatcttctagatcagattcgaatagttttccccaaa
gccgttgttcccatctgggttgaccagcagacctacatatttatccagattgttgctctg
ataccagctgccccttacggaaggctagaaactaacactaaactccttattcagccaaag
acacgccaagccaaagagaacacatttccaaaagaaggaaatgcacagggacaagttcgt
agttatggacgagaacagaaaagattgtcaaaggaattacaaaccaagcagcttcatatg
gacacagaagatgtcactgggtccaatggaagagagccagacgtcccaggtgacttgtcg
aagccacgctggtgggccatgctgggaagcatgtttgcctttgggcctgaccacaaacaa
gagttagcctggggctcgttagaactccgtgctttcagaaccatgcagtcacaggccgtc
cctcttgacaatattttcagagtatgccaagttcagcctcctagtgtatgtaacaccccc
actacctctgtgtttcacaaacactgcaccatccatgtatttccgtgggaccaagaatat
tttgatgcggagcccagctttactgtgatctatggaaaactagttaagctacattctcca
aaacaacagcaagacagaagcaagcagggtgtcctgttacctgagaaagagaagcaactg
cctgagtccccagatcacaagcagatcggctctgaccgcagtgaggatgctgctgaggcc
tgtgtgctgaaggtagtctggaacggacttgaggagctgaagagtgccgcagagttcacc
agaagtcttgagcctctccaccatgggaaagtctggattccagatgacctgagaaagaga
ctaaatatagaaatgcatgcagtagtcagaataactccactggaaaccatgcctaaaatc
ccaagatctctgaaattacaacctagagagaacttacctaaagatgtgagcgaagaagat
gtaaagactgtgttctcgtcttggctacggcagtccgctaccaccatgcttcctttggta
atatcaaaggaagcatgtattaagctggaaatcaaagatgggttgaaggagttctctctg
agtatagttcatcctcaggaaaaagaaaaggaacaaggaaaaactgtttttgtgttgagt
tccattctactgcagaagatctccgtacaagtccttctagagcccatgataagagaagaa
cccaatgtggaaattgactctcttcttccctgtctagcgctgagctttttgggcggagtg
agttccttaggtatatctgccatggagcacatcactcacagtctcctgggacgccctctg
tctcggcagctgatggccctcgtcgcaggacttaggaatggtgctcttttgatcactgga
ggaaagggaagcgggaagtcaacgttcgcgaaagccatctgtaaggaagcgcatgacctt
ctggatgcccacatggagatcgtcgactgcaaagctttgcgaggaaaaaggcttgaaaga
ataaaaaaagccctagaggtggctttttcagaggcagcctggaggcagccatctgtcatt
ctgctggatgacctggacctcattgccggactgccaagtatcccagaacacgagcacagt
cctgaagcagtgcagggccagcggcttgcacatgctttgaatgatatgatcaaagagttt
gtttccatgggaagcttggtggcactcgttgccacgagccagctccagcactccctgcac
ccttctcttgtatctgctcaaggaatccacacgttccagtgcgtccagcacattcagcct
cccagtcaggaacagagatgtgaaattctgcatagtgttgtgaagaataaactgggctgt
gatataagcaagtcccctgacttggacctgcagctcatagctaaagagacagaaacattt
gtggctcaagactttacagttcttgtggaccgagccatacactcttctctctctcgccag
catagctccaccagggaagaattgactttaacaacatcagacttccaaaaggctctctgt
gggtttcttcctgcttctctgcgaaatgtcaacctgcataaacctagagacctgggctgg
gacaagattggtggattacatgaagttcggcagatcctcatggatactgtccagttacca
gccaagtatccagaattatttgcaaacttacccatacgacagaggacgggaatattgctt
tatggtcctcctgggacaggaaaaactttacttgctggggtagttgcaagagagagtgga
atgaattttattagtattaagggaccagagttactcagcaaatacattggagccagtgag
caagctgttcgagatgttttcatcagagcacaggctgcaaaaccctgcattcttttcttt
gatgagtttgaatccatcgctcctcgaaggggccacgacaacacaggggttacagaccga
gtagtcaaccagttgctgacacagttagatggagtagaaggcttacagggagtttatgtg
ttggctgctacgagtcgccctgacttgattgaccctgccctgttgcggcctgaatccttc
actggagcggatttgaaagctctgctgtacaatgctcagctggaggccttgcagggacgg
ctgctgcccagggggcccctcgatggaggctccagctctgatagtgacctaagtctgtct
tcaatggtctttcttaaccacagcagtggttccgacgactctgctggagatggagaatgt
ggcttagatcaatcccttgtttctctcgagatgtctgagatccttccagacgaatcaaaa
ttcaatatgtaccggctctactttggaagctcatatgaatcagaacttggaaatggaacc
tcttctgacttgagctcacactgtctgtctgcaccaagctccataactcaggatttacct
gcagctcctgggaaagacccattgtttacacaacattctgtgttcaggacaccttcccaa
gaaggctgccaagatctcacacaggaacagagagaccagctgagggcagacatcagcatc
atcaaaggcagataccggagccaaagtggagaggatgaatcccttaaccagcctggacca
atcaaaaccagttttgctattagccaggcacatttaatgactgcacttgcccacacaaga
ccgtctattagtgaagatgaagggaaggaatttgctgagctgtatgaaaactttcaaaat
ccaaagaagagaaaaaatcaaagtggaacagtgtttcgaactggacagaaagtaacttta
gcataa
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integrated database retrieval system
