Mastomys coucha (southern multimammate mouse): 116098533
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Entry
116098533 CDS
T07224
Symbol
Vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcoc04131
]
116098533 (Vps50)
Membrane trafficking [BR:
mcoc04131
]
Protein recycling
Others
EARP complex
116098533 (Vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
116098533
NCBI-ProteinID:
XP_031236952
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLNDLGAFESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSADPFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDSEETAAASEG
SNAMSTEEATFDRGYVKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIVS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNHHRIRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFLEQSRSPSVSPSKQPSATSSKPVTLFEQYCSGGNPFEIQADHKDEETEDVLA
SNGYESDEQEKSAYQDYDSDSDVPEELKRDYVDEQTGDVPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLKTTLNRIQESLIDLEGSADPTASLAAAEERKEKVPSPHLNQLVILTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKAIDYEQMLLLMTNVKWDVKEIMSQHNIYVDALLKEFEQFNKRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDEID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccggcagggtctgaagagtcctcctgagagcctc
aatgatcttggtgcctttgagagccttcgggtccctggaaaggaggaattcagggaactt
cgagaacaaccaagcgaccctcaagctgaacaagagttaattaatagtattgagcaagtg
tatttttctgcggacccatttgatattgttaaatatgagctggagaagcttcctcctgtt
ctcaatcttcaagaattagaggagtacagagacaaattaaagcaacaacaagctgcagtc
tctaaaaaagtggcagatttaattcttgaaaaacaacctgcttatgtaaaggagcttgaa
agagttacatcactgcagacaggtcttcagttggctgctgttatctgcacaaatgggagg
agacacttgaacattgcaaaggaaggttttactcaggctagcctaggccttcttgccaat
cagaggaagcgtcagttgctgattggacttctgaagtcgctgagaaccataaaaacactg
caaagaaccgatgtacgattaagtgaaatgttggaggaagaggactatccaggagctatt
cagctgtgcctggaatgtcagaaggctgccagcacttttaaacactacagctgtataagt
gagctgaattcaaagctgcaggatactttggagcaaattgaggaacagctggatgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcagcaagcttac
cggcttcttggaaaaacacagactgcaatggatcaacttcatatgcacttcactcaagct
attcacaacactgtatttcaagttgtacttggctatgtggagctgtgtgcaggaaacaca
gatacaaaattccagaagcttcagtataaagatctctgtacgcacgttactccagacagc
tatattccatgcctggcggacctgtgcaaagcactgtgggaagtcatgctcagctactac
agaaccatggagtggcatgagaaacacgacagtgaagagactgctgcagcttctgaagga
agcaatgctatgagtactgaagaagccacttttgatcgtggctatgtaaagaagaagtta
gagcatggccttacgcggatatggcaggatgttcaactaaaagtaaaaacctacttgctt
ggaactgatttatctatattcaaatatgatgatttcatctttgttctggatattgtcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaggagtcc
attagaaaacaaagtgtcaattacttcaagaaccaccataggatacgacttgatgaactg
agaatgttcttagagaatgagacgtgggagctttgccctgttaagtcaaattttagcatc
ttgcagcttcatgagtttaaattcctggaacagtctcgctccccatcagtttcacctagt
aagcagccgtcagcaacttcttcaaaacccgtgactttgtttgagcagtactgcagtggt
gggaatccatttgaaattcaagctgaccacaaagatgaagaaactgaagatgtcttagcc
tctaatgggtatgaatccgatgagcaagagaagagtgcctatcaggactatgacagcgac
agtgacgttccagaggagctgaagcgtgattacgtggacgagcagactggcgatgtgccc
gtgaagagtgtttcacgagagacccttaagagcaggaagaaatcggattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggaaag
tacatgcagatgatgaacatccttaagccaatcgcctttgatgttatccatttcatgtct
cagctctttgattattacttgtatgccatatataccttttttggtcggaatgattcattg
gaatcaacaggacttggccttagtagtagcagactaaaaacaactctaaacagaattcaa
gaaagccttattgacctggagggctcagctgatccaactgcctctctcgcagcagccgag
gaaaggaaggagaaggtacccagcccacacctcaatcagctagtgattttgacatctggg
gatacattgtatgggttggcagagagagtggtagccacagaatccttagtgttcttggct
gagcagtttgagttccttcagccacatttggatgctgtgatgcctgcagtcaaaaagccc
ttcctgcagcagttttattcccagacagtctcaactgccagtgaacttcgcaaacccatt
tactggattgtggctggtaaagctattgattatgaacagatgcttctcctaatgactaat
gtgaagtgggatgtcaaagagatcatgtcacagcacaacatctatgtagatgcattgctg
aaggaatttgagcagtttaacaagcggttaaatgaagtttctaagagagttcggataccc
ttgcctgtatcaaatatactttgggaacattgtatacgattagctaacagaactattgtg
gaaggatacgccaatgtcaagaagtgcagtaatgaagggcgtgccttgatgcaactggat
tttcagcagtttttaatgaaactcgagaaactaactgacattagacctattcctgataaa
gaatttgtggagacgtatatcaaagcctactacctaactgagaatgacatggagcgttgg
atcaaagagcacagggaatattcaacgaagcagttgaccaacctggtgaatgtttgcctg
ggatctcatatcaataagaaagcaagacagaagctcctagcagctatagatgagatagac
aggcctaaaagataa
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