Mastomys coucha (southern multimammate mouse): 116098710
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Entry
116098710 CDS
T07224
Symbol
Cald1
Name
(RefSeq) caldesmon isoform X1
KO
K12327
caldesmon
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
116098710 (Cald1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcoc04812
]
116098710 (Cald1)
Cytoskeleton proteins [BR:
mcoc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
116098710 (Cald1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caldesmon
Motif
Other DBs
NCBI-GeneID:
116098710
NCBI-ProteinID:
XP_031237351
LinkDB
All DBs
Position
Unknown
AA seq
755 aa
AA seq
DB search
MDDFERRRELRRQKREEMRLEAERIAYQRNDDDEEEAARERRRRARQERLRQKQEEESLG
QVTDQVEAHVQNSVPDEESKPATANTQVEGDEEAALLERLARREERRQKRLQEALERQKE
FDPTITDGSLSVPSRRMQNDSTENETAEGEEKRESRSGRYEVEETEVVIKSYQKNSYQDA
EDKKKEEKEEEEEEEESLKGGSLGENQVEEMVEEKTSETQEEAVVTVLENGQVSTEESKV
EGDGEQDTEEIARRKKMGEEERERAEAERLRLEVEEQERERIKAEHDRKLAEEQARIEAE
QKAAAEERARREAEERARIEEEQRRVAEEQKKAKAEEEKARIEEQRQKKQLEEQRSEKRE
AKEKGEKGAEKADRKGVNEREAQDDRLQTAVPKTQEKEEERGVKGQAQRQTPQDDKPAFK
KEEVKDEKLKKEKEPKEEVKSFLDRKKGFTEVKAQNGEFMTHKLKQTENAFSPSRSGGRA
SGDKEAEGTPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKV
LEEEEQKRKQEEADRKAREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSEDKKPFKCFT
PKGSSLKIEERAEFLNKSVQKSGVKSTHQAAVVSKIDSRLEQYTNAIEGTKASRPMKPAA
SDLPVPAEGVRSIKSMWEKGSVFSSPSASGTPNKETAGLKVGVSSRINEWLTKSPDGNKS
PAPKPSDLRPGDVSGKRNLWEKQSVDKVTSPTKQV
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggatgattttgaacgccgcagagaactcaggagacaaaagagggaggagatgcggctg
gaggcagagagaattgcctatcagagaaatgatgatgatgaagaagaagccgccagggaa
cggcgccgccgagcccggcaggaaaggctgcggcagaagcaagaggaagaatccttggga
caggtgacagaccaggtggaggcccatgtccagaacagcgtcccagatgaagagtctaag
ccagccactgcaaacactcaggtagaaggtgatgaggaggctgccttactggagcgcctg
gctaggcgagaagagagacgtcaaaaacgccttcaggaagccttagagcgtcagaaggag
tttgatccgaccataacagatggcagtctctcagtcccaagcagaagaatgcaaaatgac
tcgactgaaaatgagacagcagagggggaagaaaaaagagagagtcgctcaggacggtat
gaggtggaagaaacagaagtggttatcaagtcctaccagaagaacagctatcaggatgct
gaagacaagaagaaagaagaaaaggaggaggaggaggaggaggaagagagcctgaaggga
gggagccttggcgaaaatcaggtagaggagatggtagaagagaaaacatcagaaacccaa
gaggaagctgtggtgacggtattggaaaatgggcaagtcagcacagaagagtccaaagta
gagggagatggggaacaagacacggaggagatagcccgtcgaaaaaagatgggggaggaa
gagagagagagagctgaggcagagagactgaggttggaagtggaagagcaagaacgagaa
agaatcaaggctgagcacgacagaaagctagcagaggaacaggcaagaatcgaggccgaa
cagaaagcagctgctgaggagagggcgaggagggaggccgaggagcgggcaaggattgag
gaggagcagaggagagtggctgaggagcagaagaaggccaaggcagaggaggagaaggct
aggatagaagagcagagacaaaaaaagcagctggaggagcaaaggagtgagaagcgagaa
gccaaagagaagggggaaaagggagctgagaaagcagacaggaaaggggtgaatgaaagg
gaggcgcaagacgacagactgcagacagctgtcccaaagacgcaggaaaaggaagaagaa
aggggagttaaagggcaagctcaaagacaaacgccccaagatgacaagcctgccttcaaa
aaggaagaggttaaagatgagaagcttaaaaaggaaaaagagcccaaagaagaagtcaag
agcttcttggatcgaaagaaaggatttacagaagtgaaggcacagaatggagaatttatg
acccacaaacttaaacaaactgaaaatgctttcagccccagccgttcaggaggccgggcc
agtggggacaaggaagctgaaggcaccccacaagtggaagctggtaagaggctggaggag
ctgcgccgacgccgtggggagacggagagcgaagagttcgaaaaactcaaacagaagcaa
caggaggcggccttggagctggaagagctgaagaaaaaaagggaagagagaaggaaggtc
ctggaggaagaagagcagaaaaggaagcaggaggaggctgatcgaaaagctagagaggag
gaagagaagaggaggttaaaggaagagattgaaaggagacgggcagaagccgctgagaaa
cgccagaagatgcccgaagatggcctgtccgaggacaagaagccgttcaagtgcttcact
cctaaaggctcttccctcaagatagaggaacgagcagagtttttgaataaatctgtgcag
aaaagtggtgtcaaatctactcatcaagcagcagtagtttccaagattgacagccggctg
gagcagtataccaatgcaattgaggggacaaaggcttccagacctatgaagcctgcagca
tcggatctccctgttcctgccgaaggcgtccgcagtatcaagagcatgtgggagaagggg
agtgtgttctcatccccctctgcctcgggaacaccaaataaggaaacggctggcctgaag
gtgggcgtttccagccgcatcaatgaatggctaactaaatcaccagatggcaacaagtca
cctgctcccaagccttcggacttgaggccaggagatgtatctggcaaacggaacctctgg
gaaaagcaatctgtggataaggtcacttcccccactaagcaggtctga
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