Mastomys coucha (southern multimammate mouse): 116098990
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Entry
116098990 CDS
T07224
Symbol
Herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116098990 (Herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcoc04121
]
116098990 (Herc3)
Enzymes [BR:
mcoc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116098990 (Herc3)
Ubiquitin system [BR:
mcoc04121
]
Ubiquitin ligases (E3)
HECT type E3
116098990 (Herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
116098990
NCBI-ProteinID:
XP_031237900
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGISSNLQGIVAEPQVCRFVSDRSIKEVACGGNHSVFLLEDGEVYTCGV
NTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVTQIA
CGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVKGHWAAHSSQLSARADRFK
YRVVKQIFSGGDQTFVLCSTYENSSPAVDFRTVNQTHYTNLINDETIAVWRQKLSEHNNA
NTVNGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRILFEKLMHSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLETNP
SKVLDNWWSQACPKYFMKLVTLYKGAVLYLLRGRKTFLIPVLFNNYMTATLKLLEKLYKV
NLKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQSGMKARPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNHLVGDALRELS
IHSDIDLKKPLKVIFDGEEGVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPSLEDLKELSPTEGRSLQE
LLDYPGEDIQETFCLNFTVCRESYGVIEQKKLIPGGDRVAVCKDNRQEFVDAYVNYIFQI
SVHEWYTAFSSGFLKVCGGKVLELFQPAELRAMMVGNSNYNWEELEETAVYRGDYSSTHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTATGEEYLPVAHTCYN
LLDLPKYSSKEIMKARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgttgggggtattggtctctgggccaaccaggcatcagttccaacctgcaagga
atcgtggctgagccccaggtgtgccgctttgtatcagacagaagcatcaaggaagtggcg
tgcggaggaaaccactcagtgttcctgctggaggatggggaggtttatacatgtggagta
aacaccaaggggcagcttggccacgagagggaaggtaacaagccagaacaaattggagca
ttggctgatcagcatatcatacatgtggcatgtggcgagtcacacagcctggctctcagt
gaccggggccagctgttttcttggggtgcaggaagtgatggccagctgggccttatgact
actgaggactctgtggcagtgcccaggctaatacagaaactgaaccagcagaccatatta
caggtttcctgtggcaactggcactgcttggctctggcagctgacggccagttcttcaca
tggggaaagaacagccatggacagctgggtttggggaaggagttcccctcccagaccagc
ccccagagggtgagatctttggaagggatcccgctggctcaggtggctgctggaggggct
cacagttttgccctgtctctctccggagctgtttttggctggggaatgaacaatgcaggg
cagctagggctgagtgatgaaaaagatcgagagtctccatgccatgtgaagcttttacga
acacagaaagtcgtctatattagttgtggagaggagcacacagcagttctcacaaagagt
gggggcgtgtttacctttggtgctggctcctgtggacagcttggacatgactccgtgaat
gatgaagttaatccgaggagagtcctggagctgatgggcagtgaagtaacgcagattgct
tgtggcagacagcacactctagcccttgtgccttcttctggactcatctatgcatttggt
tgtggagctaaaggtcagctggggaccggacatacatgtaatgtcaagtgcccatctcct
gtgaagggacactgggctgcccacagcagtcagctttcagctcgagctgatcgctttaag
taccgtgtcgttaagcagatcttctctggaggggaccagacttttgtactttgctccacg
tatgagaattcttctcctgctgttgacttcagaactgtgaaccaaacacattataccaac
ttaataaatgacgaaactatagccgtttggagacaaaaactctcagaacacaacaacgca
aataccgtcaatggtgttgttcagatactgtcttctgcagcttgttggaatggaagcttt
ctggaaaaaaaaattgatgaacattttaaaactagtcccaaaatccctgggattgacttg
aactcaactaggattttatttgagaagttaatgcactctcagcactccatgattctagaa
cagatactaaacagctttgaaagttgcctcattccccagttgtcaagttcacccccagat
gtggaagcaatgagaatctatttaatactaccggagtttccactgcttcaggattctaag
tattacataacgctgaccattcccctggcgatggccatcctgcggctggagacaaacccc
agcaaagtattagataactggtggtctcaggcatgccccaaatattttatgaagctggta
accctctataaaggtgccgtcctttacctcctccggggaaggaagacattcctaatccca
gtactgttcaacaattacatgactgcaaccctcaagcttctggagaaattgtacaaggta
aatcttaaggtgaagcacgtggaatacgataagttttatatccctgagatttctagtctt
gtggacattcaggaagactacctcatgtggtttttgcatcaatctgggatgaaggctaga
ccgtctatcatgcaggatgctgtaaccctttgttcctatcctttcatctttgatgcccaa
gccaagaccaagatgctacagactgatgctgagttacagatgcaggtggcggtcaatgga
gccaacctgcagaatgtcttcatgcttcttaccctggagcctctgctggccagaagcccc
ttcctggtccttcatgtccgcaggaaccaccttgttggagatgccctgagagagctgagc
attcactctgacattgacttgaagaagcctctcaaagtaatctttgatggggaagaagga
gtagatgctggtggtgttacgaaggagttctttcttttgctgttaaaagaacttttgaat
cctatttatgggatgtttacctactatcaagattcaaatctcttgtggttttcagataca
tgttttgtagagcacaactggtttcacttgattggcataacctgtggattagctatctac
aactccactgtggttgaccttcacttcccattggctctctacaagaagttactgaatgta
aagcctagcttggaagatttgaaggaactgtcaccaactgaaggaaggagtcttcaagag
ctcctagattaccctggcgaagacatccaagagaccttttgcctcaacttcacggtgtgc
cgagagagctatggggtgatagagcagaagaagttgatacccgggggagacagagtggcc
gtgtgcaaagacaacaggcaagagtttgtggatgcttatgtgaattacatcttccaaatt
tcggttcatgagtggtacacagccttctccagtggcttcctgaaggtgtgtggtggcaaa
gtcctcgagctcttccagccggcagaactgagggccatgatggtggggaacagcaactac
aactgggaagagctggaagagactgcggtctacaggggtgattattcaagcacacatccg
actgtgaaactattctgggaaacattccacgagttcccattagagaagaagaagaagttt
ctcttgttcctgacaggcagtgaccggattcccatctatggcatggccagtctgcagatc
gtcatccagtccacagccactggggaggagtacttgcctgtggcccatacctgctacaac
cttcttgacctccctaagtatagcagcaaagagatcatgaaggctcggctgacccaggcc
ctcgacaactatgagggtttcagcttggcctga
DBGET
integrated database retrieval system
