Mastomys coucha (southern multimammate mouse): 116099075
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Entry
116099075 CDS
T07224
Symbol
Usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116099075 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcoc03041
]
116099075 (Usp39)
Spliceosome [BR:
mcoc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116099075 (Usp39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
116099075
NCBI-ProteinID:
XP_031238027
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All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MSSRSKRQSHGSTRGKRESESRGSSGRIKKERDREKEPEAASSRASPVRVKREAEPAALE
VPAPALPIVRVKREREADEDSEPEREVRAKNGRVDSEDRRSRHCPYLDTINRSVLDFDFE
KLCSISLSHINAYACLVCGKYFQGRGLKSHAYIHSVQFSHHVFLNLHTLKFYCLPDNYEI
IDSSLEDITYVLKPTFTKQQIANLDKQAKLSRAYDGTTYLPGIVGLNNIKANDYANAVLQ
ALSNVPPLRNYFLEEDNYKNIKRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQ
AVVLCSKKTFQITKQGDGVDFLSWFLNALHSALGGTKKKKKTIVNDVFQGSMRIFTKKLP
HPDLPAEEKEQLLHNDEYQETMVESTFMYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAK
FNGITEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLR
EYLSEEVQAVHKNTTYDLIANIVHDGKPSEGSYRIHVLHHGTGKWYELQDLQVTDILPQM
ITLSEAYIQIWKRRDNDETNQQGA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtctagccggtccaagcggcagtctcacggttccacccgtgggaagcgcgagtccgag
tctcgtggcagttcgggtcgcatcaagaaggagcgagaccgggagaaggagcccgaggcg
gcgagctcccgggctagcccggtccgcgtgaagcgggaggccgagccggctgcgctagag
gtcccggcgcccgcgctcccgatcgtgcgggtgaagcgtgagcgcgaggcggatgaagac
tcggagcccgagcgggaggtgcgagcaaagaatggccgagtggattctgaagaccggagg
agccgtcactgtccgtacttggataccattaataggagtgtgctggacttcgactttgag
aaactctgctccatttctctctcgcacatcaatgcatacgcgtgcctggtgtgtggcaag
tactttcaaggccggggcttaaagtctcatgcctacatccacagtgtccagttcagccac
catgtctttctcaacctgcacactctcaagttttactgccttcctgacaactatgagatc
atcgattcctcgctggaggatatcacgtatgtgttgaagcctactttcacaaagcagcaa
attgcaaacttggacaagcaagccaaattgtcccgtgcatatgatggtaccacttacctg
ccagggatcgtgggactgaacaacataaaagccaacgactatgcaaatgctgtgctgcag
gctctatctaacgttcctcctcttcggaactacttcctggaggaagacaattacaagaac
atcaagcgtcctccaggggatatcatgttcttgttggtccagcgttttggagagctgatg
agaaagctctggaacccccgaaacttcaaggcacatgtctcacctcatgagatgcttcag
gctgttgtactttgcagcaagaagactttccaaattaccaaacaaggggatggagttgac
ttcctgtcttggtttctgaatgctctacactcagctctgggaggcaccaagaagaagaaa
aagactattgtgaatgatgttttccagggatcgatgagaattttcaccaaaaagcttcct
catcctgatctgccagcggaagagaaagagcagctgctccataatgacgagtaccaagag
acgatggtggagtccacattcatgtacctgacgcttgaccttcccactgccccgctctat
aaggatgagaaggagcagctcatcatcccccaggtgccactcttcaacatcctggccaag
ttcaatggcatcacggagaaggaatacaagacttataaggagaacttcctgaagcgcttc
cagctcaccaagctgcctccgtatctaatcttttgcatcaagagatttactaagaacaac
ttctttgtggagaagaatccaacaattgtcaacttccctatcacaaatgtggatctgaga
gaatacttatctgaagaagtccaagcagtccacaagaacactacctatgatctcattgcc
aacatcgtgcatgatggcaagccttctgagggctcctacaggatccatgtgcttcatcat
gggactggcaagtggtatgaattgcaagacctccaggtgactgacattctgcctcagatg
atcacattgtctgaggcgtacattcagatttggaagaggcgggataatgatgaaaccaac
cagcagggggcttga
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integrated database retrieval system
