Mastomys coucha (southern multimammate mouse): 116099153
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Entry
116099153 CDS
T07224
Symbol
Nfasc
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116099153 (Nfasc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mcoc04515
]
116099153 (Nfasc)
Cell adhesion molecules [BR:
mcoc04515
]
Immunoglobulin superfamily
L1 family
116099153 (Nfasc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
116099153
NCBI-ProteinID:
XP_031238218
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MRRLAARGAAGDAREVAAPGADIWDCAQGWSRSSWRLTDLCATWEPGVFLPSANGSRASA
GVLKSRPNEAEKLSPVWKAHIERHKASRARGPGSGEQGLVLRMARQQAPPWVHVALILFL
LGLGGAIEIPMDPSIQNELTQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRN
SRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSK
SPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLY
FSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTNNPYNDSSLRNHPDIYSARGVAE
RTPSFMYPQGTSSSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKAL
RITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRAN
GNPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANA
FVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVY
ENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQL
ECRVKHDPSLKLTVSWLKDDEPLYIGNRMKKEDDSLTIFGVAERDQGSYTCMASTELDQD
LAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDY
VVQFEEDQFQPGVWHDHSKFPGSVNSAVLHLSPYVNYQFRVIAVNEVGSSHPSLPSERYR
TSGAPPESNPGDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTV
WGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPDTVIGYSGEDLPSAPRRFRVRQPNLETI
NLEWDHPEHPNGILIGYTLRYVPFNGTKLGKQMVENFSPNQTKFSVQRADPVSRYRFSLS
ARTQVGSGEAATEESPAPPNEATPTAAPPTLPPTTVGTTGLVSSTDATALAATSEATTVP
IIPTVVPTTVATTIATTTTTTTAAAATTTTTTTTTTESPPTTTIHETAPDEQSIWNVTVL
PNSKWANITWKHNFRPGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLFPGMTYTLRVYS
RDNEGISSTVITFMTSTAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKY
PVREKKDVPLGPEDPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGE
GQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggctggcagcgagaggtgctgcaggggacgcgagggaagtggcggcgccggga
gcggacatctgggactgcgcccagggctggagccggagctcctggaggttgactgactta
tgtgcgacttgggagcctggagttttcctgccctctgccaacgggagcagagcctctgct
ggtgttttgaaaagcagaccgaatgaggcagagaagctgagccctgtctggaaagcccac
atagagcggcacaaggcatcgagagcccgtgggccgggcagcggggagcagggcctggtg
ctgaggatggccaggcagcaggcgccaccttgggtccacgtagccctcatcctcttcctc
ctcggcctcggaggggccattgagattccgatggatccaagcattcagaatgagctgacc
caacccccaactatcaccaagcagtctgtgaaggaccacattgtggacccccgagataac
atcctgattgaatgtgaagctaaaggcaaccccgcccccagttttcactggactcgcaac
agcagattcttcaacattgccaaggacccacgggtgtccatgaggaggaggtctgggacc
ttggtgatcgacttccgcagtggtgggcggcctgaggaatacgaaggggagtaccagtgc
tttgcccggaacaaatttggcactgcgcttagcaaccgcatccgcctgcaggtgtccaaa
tctcccctgtggcccaaggaaaacttagaccctgtcgtggttcaagagggtgcccccttg
acgctgcagtgcaaccccccacctggcctcccatcccccgtcatcttctggatgagcagc
tccatggagcccatcacccaggacaagcgtgtctcccagggtcataacggggacctatac
ttctccaacgttatgctgcaggacatgcagaccgactacagctgtaacgcgcgcttccac
ttcacccacaccattcagcagaagaatcccttcaccctcaaggtcctcaccaacaacccc
tataatgactcgtccttaagaaaccaccctgacatatatagtgcccgaggagttgcagaa
agaacgcccagcttcatgtacccccagggcacctcgagcagtcagatggttctacgcggc
atggacctgctgctggagtgcattgcctctggggtcccaacaccagacattgcatggtac
aagaaaggtggggacctcccatctgacaaggccaagttcgagaactttaacaaggctctg
cgcatcaccaatgtgtccgaagaggactctggggaatatttctgcctggcctccaacaag
atgggcagcatccggcacacgatctcggtgagagtaaaggctgctccttactggctggat
gagcccaagaacctgatcctggctcctggggaagatgggagactggtgtgccgagccaat
gggaacccgaagccgaccgtgcagtggatggtgaatggagaacctttgcaatcggcacca
cccaaccccaaccgcgaggtggccggagacactatcatcttccgggacactcagatcagc
agcagggcagtgtaccaatgtaacacatccaacgaacatggctacctgctggccaacgcc
tttgtcagcgtgttagatgtaccccctcggatgctgtctccccggaaccagctcatcagg
gtgatcctttacaaccggacgcggctggactgtccattctttgggtctcccattccaaca
ctccgatggtttaagaatgggcaaggaagcaacctggatggtggtaactaccacgtctat
gaaaacggcagtctcgaaatcaagatgattcgcaaagaggaccaaggcatctacacctgc
gtggccaccaacatcctgggcaaagctgaaaatcaagtccgcctggaagtcaaagacccc
accaggatctacaggatgcccgaggaccaggtggccaagaggggcaccacagtgcagctg
gagtgccgcgtgaagcatgacccctccttgaagctcacagtctcctggctcaaggacgat
gagccgctctacattggaaacaggatgaagaaggaagacgactccctgaccatctttgga
gtggcagagcgggaccaaggcagttacacgtgcatggccagtacggagctggaccaggac
ctggcaaaggcctacctcactgttctagctgatcaggccactccaactaaccgtttggct
gccctgcccaaagggcggccagaccgacccagggacctggagctcactgacctggccgag
aggagcgtgaggctgacctggatcccgggagatgataacaacagtcctatcacagactac
gtcgttcagtttgaagaggaccagttccaaccaggggtctggcatgaccactccaagttc
ccaggcagcgtcaactcagccgtcctccatctgtccccatatgtcaactaccaattcaga
gtcattgctgtcaacgaggttgggagcagccaccccagccttccatccgagcggtaccga
accagcggggcaccccccgaatctaatcctggtgatgtgaagggcgaagggacaagaaag
aacaatatggagatcacatggacgcctatgaatgctacctccgccttcggccccaacctg
cgctacattgtcaaatggcgacggagagagacccgagagacttggaacaatgtcactgtg
tggggctctcgctatgtggtggggcagacacctgtctatgtaccctatgagatccgagtc
caggctgaaaatgactttgggaaaggccccgagcctgacaccgtcatcgggtattcagga
gaagacttacccagtgcccccaggcgtttcagagtccgacaacccaacctggagaccatc
aacctggagtgggaccacccagagcaccccaacggaatcctgattggatacactctcaga
tacgtgccctttaatggaaccaagctgggaaagcagatggtggaaaacttctctcccaat
cagaccaagttctcggtgcagagagcagaccctgtgtctcgttaccgcttctccctcagt
gccaggacgcaggtgggctcaggagaagcagccacggaggagtccccagcacctccaaat
gaagctactccaactgcagctcctcccacgttgcccccgactaccgtgggtaccacaggc
cttgtgagcagtactgatgctactgcccttgctgccaccagtgaagccacaacagttccc
atcatcccaaccgtcgtacctactactgtcgccaccaccattgccacaactactacaaca
accactgccgccgctgccaccaccaccaccaccaccaccaccaccacggagagtcctccc
actaccaccattcacgaaaccgcccccgacgagcagtccatttggaacgtcacagtgctc
cccaacagtaaatgggccaacatcacctggaagcacaatttcaggcctggaactgacttt
gtggttgagtacatcgacagcaaccatacgaaaaaaactgtccctgttaaggcccaggcc
cagcctatacagctgacagacctctttcccgggatgacgtacacgttgcgggtgtattcc
cgggacaacgagggcatcagcagtaccgtcatcacctttatgaccagtacagcttacacc
aacaaccaggcagacatcgccacccagggctggttcatcgggctcatgtgtgccattgcc
cttctggtgctgatcctgctcatcgtctgcttcatcaagaggagtcgcggtggcaagtac
ccagtgcgagaaaagaaggatgtccccttgggccctgaagaccccaaagaagaagatggc
tcatttgactatagtgatgaggacaacaagcccctgcagggcagccagacatctctggat
ggcaccatcaagcagcaggagagtgatgacagcctggtggactacggtgaaggtggtgag
ggccagttcaatgaagatggctcctttatcggccagtacactgtcaaaaaggacaaggag
gagacggagggcaatgagagctcagaggccacgtcgccagtcaatgccatctattccctg
gcctga
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integrated database retrieval system
