Mastomys coucha (southern multimammate mouse): 116099203
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Entry
116099203 CDS
T07224
Symbol
Aplf
Name
(RefSeq) aprataxin and PNK-like factor isoform X1
KO
K13295
aprataxin and PNK-like factor [EC:3.1.-.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116099203 (Aplf)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
116099203 (Aplf)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
116099203 (Aplf)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCHH
FHA_2
Yop-YscD_cpl
FHA
POLR1D
ELM2
Motif
Other DBs
NCBI-GeneID:
116099203
NCBI-ProteinID:
XP_031238327
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MSSDFFLQPLDGGPRVPVGPGQTVIGRGPLLGITDKRVSRRHAILEVVDSQLRIKPIHRN
PCFHQSSEKSRLLPMETQVWSPLYPGDSFSLLLDKYAFRVFSTESEVEMECTLRNSQMLD
EDDILSEMQKSPVVNLPDKTTGASQLQGSPEITKAKCPTIDPMSSSGECRAFHEHQPHPT
QRKRILPAWMLAGSLSDRSLSLPAESGDKDVIQRSGKEGTCEDKMLVNTSWHGRKRFIPS
GNSKSVSAEQDPGKKCRKSDQEGPAVSSEAVPESSSSITVSDPDVDIVKTNKQREATVIE
ELGEVSKRKAVTKPTTDEEGETVSHPESPASVQSKSFPEKSQGCRPESSSAPSSPDASHA
DAADSVLGCSEENKVGRTPCMYGANCYRKNPFHFQHFSHPGDSDYGDVHGTDEGVTGDRP
ECPYGMSCYRKNPQHKMEYRHSALPTRVAIDEDDDDVGQPSDDEDEEDYEPTDEDSDWQP
GKDEEEREDVDELLKEAKRFMRRKK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggacttctttctgcagcctctggacggcggtccccgcgtgcccgtggggccg
ggccagactgtgataggccgcgggccgctgctgggaataacagacaaaagagtatctaga
agacatgccattcttgaagtggttgacagtcagcttcgaatcaaaccaatccataggaat
ccgtgtttccaccagtcctcggagaagagccggctcttgccaatggagacacaagtgtgg
agcccgttgtatcctggggatagcttctccttgttacttgacaagtatgctttccgtgtt
ttctctacagaatctgaagtggaaatggagtgtactctgagaaacagtcagatgcttgat
gaagatgatatattgagtgagatgcagaagtcccctgtggttaacttacctgataagaca
actggtgcctcacagctgcaaggaagccccgaaataaccaaggccaagtgtcccaccata
gatcccatgtcctcttcaggtgaatgcagagctttccatgagcaccagccacatcctacc
cagaggaaaagaatcctcccagcttggatgttagcgggaagtctaagtgaccggagcctt
tccttgcctgctgagagcggagataaggatgtcatccagaggagtggaaaagaaggaacc
tgtgaagataaaatgctagtaaatacatcatggcatgggagaaagcggtttattccatca
ggaaattcaaaaagtgtgtcagcagaacaagaccctgggaagaaatgcagaaagtctgac
caggaaggaccggctgtttcttctgaggctgttccagaatcatcgtcttcaatcacagta
agtgacccagatgtggatattgtgaagacaaataaacagagggaagcaactgtaatagag
gagcttggtgaggtctctaaacgtaaagccgtcaccaaaccaaccacagacgaagagggc
gagacagtgagtcatcccgagagtcccgcaagtgtccaaagcaagtcatttcccgagaaa
tctcaaggatgccgtcctgagtccagctctgctccctccagtcctgatgcttcgcacgca
gacgcagctgattcagtgctaggctgttcagaagaaaacaaggtcgggaggacgccctgc
atgtacggggccaactgctacaggaagaatcctttccattttcaacacttcagccaccct
ggtgatagtgattatggagatgtacatggcacagatgaaggggtaactggtgacaggccc
gagtgtccctatgggatgtcttgttacaggaagaaccctcagcacaagatggaatatagg
cacagtgcacttcccaccagagttgctatagatgaagatgatgatgatgttggacaaccc
agtgacgacgaggatgaggaagactatgagccgacagatgaagattcagattggcaacca
ggaaaggatgaagaggagagggaagatgtggatgagcttttgaaagaagcgaaaaggttt
atgagaaggaaaaagtag
DBGET
integrated database retrieval system
