Mastomys coucha (southern multimammate mouse): 116099236
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Entry
116099236 CDS
T07224
Symbol
Plxna1
Name
(RefSeq) plexin-A1
KO
K06820
plexin A
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
116099236 (Plxna1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
TIG
Plexin_RBD
TIG_2
Sema
TIG_plexin
PSI
PSI_PlexinA-B
RasGAP
Motif
Other DBs
NCBI-GeneID:
116099236
NCBI-ProteinID:
XP_031238383
LinkDB
All DBs
Position
Unknown
AA seq
1912 aa
AA seq
DB search
MMLAPIGPAYLGLRSQPTMPLPPLSPRTLLLLLLLLLRGVWIAISSPPAGLGPQPAFRTF
VASDWGLTHLVVHEQTGEVYVGAVNRIYKLSGNLTLLRAHVTGPVEDNEKCYPPPSVQSC
PHGLGSTDNVNKLLLLDYAANRLLACGSASQGICQFLRLDDLFKLGEPHHRKEHYLSSVR
EAGSMAGVLIAGPPGQGQAKLFVGTPIDGKSEYFPTLSSRRLMANEEDADMFGFVYQDEF
VSSQLKIPSDTLSKFPAFDIYYVYSFRSEQFVYYLTLQLDTQLTSPDAAGEHFFTSKIVR
LCVNDPKFYSYVEFPIGCEQAGMEYRLVQDAYLSRPGQALAKQLGLAEDEEVLFTVFAQG
QKNRVKPPKESALCLFTLRAIKEKIKERIQSCYRGEGKLSLPWLLNKELGCINSPLQIDD
DFCGQDFNQPLGGTVTIEGTPLFVDKEDGLTAVAAYDYQGRTVVFAGTRSGRIRKILVDL
ANPSGRPALAYESVVAQEGNPILRDLVLSPNRQYLYAMTEKQVTRVPVESCVQYTSCELC
LGSRDPHCGWCVLHSICSRQDACERAEEPQRFASDLLQCVQLTVQPRNVSVTMSQVPLVL
QAWNVPDLSAGVNCSFEDFTETESILEDGRIHCHSPSAREVAPITQGQGDQRVVKLYLKS
KETGKKFASVDFVFYNCSVHQSCLACVNGSFPCHWCKYRHVCTNNAADCAFLEGRVNMSE
DCPQILPSTHIYVPVGVVKPITLAARNLPQPQSGQRGYECLFHIPGSPARVTALRFNSSS
LQCQNSSYSYEGNDVSDLPVNLSVVWNGNFVIDNPQNIQAHLYKCPALRQSCGLCLKADP
RFECGWCVAERRCSLRHHCPADSPASWMHAHHGSSRCTDPKILKLSPETGPRQGGTRLTI
TGENLGLRFEDVRLGVHVGKVLCSPVESEYISAEQIVCEIGDASTLRAHDALVEVCVRDC
SLHYRALSPKRFTFVTPTFYRVSPSRGPLSGGTWIGIEGSHLNAGSDVAVSIGGRPCSFS
WRNSREIRCLTPPGQTPGSAPIVININRAQLSNPEVKYNYTEDPTILRIDPEWSINSGGT
LLTVTGTNLATVREPRIRAKYGGIERENSCMVYNDTTMVCRAPSIDNPKRSPPELGERPD
EIGFIMDNVRTLLVLNSSSFLYYPDPVLEPLSPTGLLELKPSSPLILKGRNLLPPAPGNS
RLNYTVLIGSTPCILTVSETQLLCEAPNLTGQHKVTVRAGGFEFSPGMLQVYSDSLLTLP
AIVGIGGGGGLLLLVIVAVLIAYKRKSRDADRTLKRLQLQMDNLESRVALECKEAFAELQ
TDIHELTSDLDGAGIPFLDYRTYAMRVLFPGIEDHPVLKEMEVQANVEKSLTLFGQLLTK
KHFLLTFIRTLEAQRSFSMRDRGNVASLIMTALQGEMEYATGVLKQLLSDLIEKNLESKN
HPKLLLRRTESVAEKMLTNWFTFLLYKFLKECAGEPLFMLYCAIKQQMEKGPIDAITGEA
RYSLSEDKLIRQQIDYKTLTLNCVNPEHENAPEVPVKGLNCDTVTQVKEKLLDAVYKGVP
YSQRPKAGDMDLEWRQGRMARIILQDEDVTTKIDNDWKRLNTLAHYQVTDGSSVALVPKQ
TSAYNISNSSTFTKSLSRYESMLRTASSPDSLRSRTPMITPDLESGTKLWHLVKNHDHLD
QREGDRGSKMVSEIYLTRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDE
QADKHQIHDSDVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKNSITDACLSVVAQTFMDSC
STSEHKLGKDSPSNKLLYAKDIPNYKSWVERYYADIAKMPAISDQDMSAYLAEQSRLHLS
QFNSMSALHEIYSYIAKYKDEILVALEKDEQARRQRLRSKLEQVVDTMALSS
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atgatgctcgcccctataggacctgcataccttggcttgaggtcccagcccaccatgcca
ctgccacctctgagccctcggacactgctgctgctgctgctgctgctgctgaggggtgta
tggatagccatcagctctcccccagctggtttgggtccacaacctgccttccgcaccttt
gtggccagtgactggggcctcactcatctggtggttcacgaacagacaggagaggtatat
gttggcgctgtgaaccgtatttacaagctgtcagggaacctaaccctgcttcgggcccat
gtgacaggccctgtagaagacaatgagaaatgctacccaccccccagtgtacagtcgtgc
ccacatggtctgggcagcacagacaacgtcaacaagcttctgctgctggactatgctgcc
aaccgcctgttggcctgtggcagtgcctcacaaggcatttgccagttcctgaggttggac
gatctcttcaagctgggcgagccacaccaccgcaaggaacactacctgtccagcgtgcga
gaggctggcagcatggcaggagtgcttattgctgggccacccggccagggccaggccaag
ctcttcgtgggcacacccattgatggcaaatcagagtactttcccactctgtccagtcgc
cggctcatggccaatgaggaagatgctgacatgtttggctttgtgtaccaggatgagttt
gtgtcatctcagctcaagatcccttcagacacactgtccaagttcccagcctttgacatc
tactatgtgtacagtttccgcagcgagcagttcgtatactacctcaccctgcagctggac
acacagcttacctcgcctgatgccgcaggtgagcacttcttcacctccaagattgtgcgg
ctatgtgtgaatgaccccaagttctactcctatgtggagttccccattggctgtgagcag
gctggaatggagtaccgcctggtgcaggatgcctacctgagccggccaggacaggccctg
gccaagcagctgggccttgctgaggatgaggaggtgttgttcaccgtgttcgcacagggt
cagaagaaccgtgtgaagccacccaaggagtcggcattgtgcctgttcacactgagggcc
atcaaggagaaaatcaaggagcgcatccaatcatgctaccgtggagaaggcaagctctca
ctgccttggctgctcaacaaggagctgggctgcatcaactcgcccctgcagattgatgac
gacttctgcgggcaggatttcaaccagccattggggggcacggtcaccatcgaaggcaca
cccctttttgtggacaaggaagatggcctgactgctgtggctgcctatgactaccaaggc
cgcactgtggtttttgctggcactcgcagcggccgcatccgcaagattctggtggatctt
gcaaaccccagtggcaggccggctctggcttatgagagtgtggtggctcaggaaggcaac
cctatcctgcgtgacctggtcctcagccccaaccgccagtacctctatgctatgacagag
aagcaggtgacgcgggtgcctgtggaaagctgtgttcagtatacttcctgtgagctgtgc
ctggggtctcgggatccccactgtggctggtgtgtcctgcacagcatctgctctaggcag
gatgcctgtgagagggcagaagagccccaacgtttcgcctctgacctgctgcagtgtgtg
cagttgactgtccagccacgcaatgtgtcagtcaccatgtcccaggtgccgctcgtgctg
caggcttggaatgttcctgacctctcagctggtgtcaactgctcctttgaggacttcacg
gagactgagagcatcctggaagatggccgcatccattgccactcaccttctgcccgggaa
gtggcacccatcacacagggtcagggagaccagcgggtggtgaagctctacctcaagtcc
aaggagacaggaaagaagtttgcatctgtggactttgtcttctataactgcagtgttcac
cagtcctgcctggcatgtgtcaatggctccttcccctgccactggtgcaaataccgccac
gtttgcaccaacaatgcggccgactgtgcctttctggaaggccgtgtcaacatgtctgag
gactgcccacagatcctgccatctactcacatctatgtgccagtgggtgtggtgaagccc
atcaccctggctgcacggaacctgccgcagccacagtcaggtcagcgagggtacgagtgc
cttttccacatcccaggcagcccggcccgagtcactgcactgcgcttcaacagctccagc
ctgcagtgccagaactcctcgtactcctatgaggggaatgatgtcagtgatctgcctgtg
aacctgtcagttgtgtggaatggcaactttgtgattgacaatccccagaacatccaggcc
cacctctacaagtgcccagccttacgccagagttgcggcctctgcctcaaggcagaccca
cgctttgagtgtggctggtgcgtagctgagcgccgctgttccctacgccaccactgccca
gctgactcgccagcctcctggatgcatgcccaccatggcagcagccgctgcacagatccc
aagattctcaagctgtccccagagacaggccctcggcagggagggactcgactaaccatc
accggtgagaatctgggcctccggtttgaggatgtgcgactaggcgtgcacgtgggcaag
gtgctttgcagccctgtggagagcgagtacatcagcgcagaacagattgtctgcgagatt
ggagatgccagcacattgcgggcccatgacgccctggtggaggtgtgtgtgcgggactgc
tccctccactaccgagcactgtcccctaaacgcttcacctttgtgacaccgaccttctac
cgtgtgagcccatcccgtgggcctctgtctggaggtacctggattggcattgaaggaagc
catctgaatgcaggcagtgatgtagctgtgtccattggcggtcggccctgctccttctcc
tggagaaactcacgagagatccgatgcctgacaccgcctgggcagactcctggcagcgcc
cctattgttatcaacatcaaccgtgcccagctctccaaccccgaggtgaagtacaactat
actgaagaccctactatcctgaggatcgaccccgagtggagcatcaacagtggtgggaca
ctcctaacagtcacaggcaccaatctggccaccgtccgtgaacctcgaatccgggccaaa
tatggaggcattgagagggaaaatagctgcatggtgtacaatgacaccaccatggtgtgc
cgggcgccgtctatagacaaccccaagcgcagcccaccagaactgggagagcggccagat
gagattggtttcatcatggacaatgtacgcacgctgctggtactcaacagctcctcattc
ctctactacccggaccctgtactggagccactcagtcctactgggctcttggagctgaag
cccagctccccgctcatcctcaagggacggaatctcctgccacctgctcctggcaattcc
cggctcaactacacggtgctcatcggctccacaccttgtatcctcaccgtgtctgagaca
cagctgctgtgtgaagcacccaacctcacagggcagcataaagtcacggtgcgggctggg
ggcttcgagttctcacctgggatgctgcaggtgtattcggacagcctgctgacattgcca
gccattgtgggtatcggtggggggggtggcctcttgctgctggtcatcgtggctgtgctc
atcgcctacaaacgcaaatcccgcgatgctgaccgtactctcaagcggctgcagctccag
atggacaacttggagtcacgggtggccctcgagtgcaaggaagcctttgcagagctacag
acggacatccatgagctgaccagtgacctggatggtgctggcatccccttccttgactac
cgcacatatgccatgcgagtgctgtttcctgggattgaggaccatcctgtactaaaggag
atggaggtgcaggccaatgtggagaagtcgctgacactgttcggacagctattgaccaag
aagcatttcctgctaaccttcatccgtacactggaggcccagcgtagcttctccatgcga
gaccgtgggaacgtggcctccctcatcatgacagccctgcagggtgagatggagtatgcc
accggagtgctaaagcagttgctgtctgacctcatcgagaaaaacttggaaagcaagaac
caccccaagctcctgttacggaggacagaatcagtggcagagaagatgttgaccaactgg
ttcaccttccttttgtataagtttctcaaggagtgtgctggggaaccgctcttcatgctg
tactgtgccatcaagcagcagatggagaagggccctattgacgccatcacgggggaggcc
cgctactctctgagtgaagacaagctcatccggcagcagattgactacaagaccctgacc
ctgaactgtgtgaaccctgagcatgagaacgcacctgaggttcctgtgaagggactgaac
tgtgacaccgtgacccaggtcaaggagaagctactggatgctgtgtacaagggtgtgcct
tactcacagcggcccaaggctggggacatggacctggagtggcgccagggtcgtatggca
cgcatcatccttcaggatgaggacgtcaccaccaaaattgataatgactggaagaggctg
aacacactggctcactatcaggtaacggatgggtcatcagtggcactagtacccaagcag
acatctgcctacaacatctccaactcctctaccttcactaagtccctcagcagatacgag
agcatgctgcgtacagccagtagccccgacagcctacgctcacgaacacccatgatcacg
ccagacctggaaagtggaacaaaactgtggcacctggtaaagaaccacgatcacctggac
caacgtgaaggcgaccgtggcagcaagatggtctctgagatctacctgacaaggctgctg
gctaccaagggaacactgcaaaagttcgtggatgacctgttcgagaccatcttcagcacg
gcacaccgcggctcagccctgcctctggccatcaagtacatgtttgacttcttagatgag
caggctgacaagcaccagatccacgactcagatgtgcgccatacctggaagagcaattgc
ctgcctctgcgcttctgggtgaatgtaattaagaaccctcagttcgtgttcgacatccac
aagaacagcatcacagacgcctgcctctcagtagtagcgcagaccttcatggactcctgc
tctacctcagagcacaagctgggcaaagactcaccctccaacaagttactctatgccaag
gacatccccaactacaagagctgggttgaaaggtactatgctgacattgccaagatgccc
gccatcagtgaccaagacatgagcgcctacctggcagagcagtcccggctgcatctcagc
cagttcaacagcatgagtgccctgcatgagatctactcctacattgcgaagtacaaggat
gagattctggtggctctggagaaagatgagcaggctcgaaggcagcggcttcgaagcaaa
ctggagcaggtggtggacacaatggccctgagcagctga
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integrated database retrieval system