Mastomys coucha (southern multimammate mouse): 116099307
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Entry
116099307 CDS
T07224
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03013
Nucleocytoplasmic transport
mcoc05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116099307
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116099307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcoc03019
]
116099307
Messenger RNA biogenesis [BR:
mcoc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116099307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
116099307
NCBI-ProteinID:
XP_031238540
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MAKKYAKKEATGRNWQGDTEEEGTFSLASEDVLRNRTIKRAKRRHARPQSNGKGTSKGSK
NLAVPSGKGEFNGGPGEKPVEVLTTRRNTARAAAEPKAAWGPVTANESPSLEHEQISKPQ
TNVHSQQQPVSPGLAFSQACAGSVYHRQLTGLNYSVRDWIVKHVNANPFCDLTPVFKQYE
KYLAAIEKQLHSSCGCLSENELNRGLVGTQPSSLTVATELQPELVTSEKTEFMCEKKTDP
AQGATSTSCNFGKNTETPVWGSLNSGPMYRVSSATRSPNLSGKSTTQKKPGSAKALESPP
RGSSDECKGKRDGPPKAPLVEEKEESAFYCKKCKLFYKKDNEFKEKGVGTLYLKSTANQK
TRLLVQDTKLGNMILNILIPPDMPCTRMGKNNVLIVCVPNPPIDKKNATIKVSMLIRVKT
SKDADELHKILLQKTDA
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaatatgccaagaaggaagccacaggcaggaactggcaaggagacactgaa
gaggagggaacattctcactggccagtgaggacgtcctgaggaatagaaccataaagaga
gccaagcggagacatgcccgcccccagtccaatggtaaagggacttccaaagggagtaaa
aatttggctgtgccttccggaaaaggagaatttaacggtggccctggagagaagcctgtg
gaagtactgacgaccagaaggaacacagctagggctgcagcagagcccaaggcagcctgg
ggtcctgttacagcaaatgaatccccctctttggagcatgagcagatctcaaagcctcag
actaacgtccacagtcagcagcagcctgtctctcctggccttgctttcagtcaagcctgt
gctgggagtgtctaccacaggcagttgactggcctgaactactctgtcagggactggata
gtgaagcacgtgaacgcaaatccgttctgtgatctgacgcctgtgtttaagcagtatgag
aaatacttggccgccatcgaaaagcagctccatagcagctgcggctgtctttctgaaaat
gagctcaacaggggcttggttgggacacagccttcttccctaactgttgccactgaacta
cagccagagttggtcacatctgaaaagacggagtttatgtgtgagaagaaaactgaccca
gcacaaggagcaacaagtacctcctgtaactttgggaaaaacactgaaaccccagtttgg
ggttccttaaactctggacccatgtacagagtttcatcagccaccagaagccccaactta
agtgggaaaagtaccacccagaagaaaccagggtctgcaaaagctctggagagtccgcca
cgtggcagcagtgatgaatgcaaagggaaaagggatggacctcccaaagcgccccttgtt
gaagaaaaggaagagagtgctttctactgcaaaaagtgtaaactattttacaagaaagac
aacgaatttaaagaaaagggtgttggcacgctgtatttaaaatctacagccaatcagaag
acgcggctcttagtgcaggatactaagttaggcaacatgatcctgaacattctgatccca
ccggatatgccgtgtacccggatggggaaaaataatgtccttatcgtctgtgtacccaat
ccaccgattgataagaagaatgccaccatcaaggtctccatgctaattcgggtaaaaaca
agtaaggatgctgatgaactgcacaaaattttactgcagaaaacggatgcctga
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