KEGG   Mastomys coucha (southern multimammate mouse): 116099356
Entry
116099356         CDS       T07224                                 
Symbol
Snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
  KO
K11097  small nuclear ribonucleoprotein E
Organism
mcoc  Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcoc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116099356 (Snrpe)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mcoc03019]
    116099356 (Snrpe)
   03041 Spliceosome [BR:mcoc03041]
    116099356 (Snrpe)
   03032 DNA replication proteins [BR:mcoc03032]
    116099356 (Snrpe)
Messenger RNA biogenesis [BR:mcoc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     116099356 (Snrpe)
Spliceosome [BR:mcoc03041]
 Complex A
  U1 snRNP components
   Sm proteins
    116099356 (Snrpe)
  U2 snRNP components
    116099356 (Snrpe)
 Complex B
  U1 snRNP components
    116099356 (Snrpe)
  U4/U6.U5 tri-snRNP components
    116099356 (Snrpe)
 Complex C
  U2 snRNP components
    116099356 (Snrpe)
DNA replication proteins [BR:mcoc03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     116099356 (Snrpe)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 116099356
NCBI-ProteinID: XP_031238660
LinkDB
Position
Unknown
AA seq 120 aa
MRFRFQVLLPEVPFRGGLPSRVVFVTSTMAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQ
VWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQSVSN
NT seq 363 nt   +upstreamnt  +downstreamnt
atgcgcttccgtttccaggtcttgcttccggaagtccctttccgaggcggccttcctagt
cgtgtggtctttgtgacttccaccatggcgtatcgcggccagggccagaaggtgcagaag
gtgatggtgcagcccatcaaccttatcttcagatacttgcaaaatagatctcgaattcag
gtgtggctgtatgaacaagtgaatatgcggatagagggctgtattattggctttgatgaa
tacatgaaccttgtattagatgatgcagaagagattcattctaaaacaaagtcaagaaaa
caactgggtcggatcatgctaaaaggagataatattactctgctccaaagtgtttccaac
tag

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