Mastomys coucha (southern multimammate mouse): 116099365
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Entry
116099365 CDS
T07224
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
116099365 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcoc03000
]
116099365 (Bhlhe40)
Transcription factors [BR:
mcoc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116099365 (Bhlhe40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
116099365
NCBI-ProteinID:
XP_031238683
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MERIPSAQPPPTCLPKAPGLEHGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNIEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGASRKPLDSAPKAMDFKEKPSFLAKGSEGPGKNCVPVIQRTFAPSSGEQSGSDTD
TDSGYGGELEKGDLRSEQPYFKSDHGRRFAVGERVSTIKQESEEPPTKKSRMQLSEEEGH
FAGSDLMGSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNTSAA
ALSSFMNPDKIPTPLLLPQRLPSPLAHSSLDSSALLQALKQIPPLNLETKD
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccacctcctacctgcctgcccaaagcgccagggctg
gagcacggagacctgtcagggatggattttgcccacatgtaccaagtgtacaagtccagg
cggggaataaaacggagcgaagacagcaaggaaacttacaaactgccgcaccggctgatt
gagaaaaagagacgtgaccggattaacgagtgcattgcccagctgaaggatctcctaccc
gaacatctcaaacttactactttgggtcacttggagaaagcagtggttctggagcttacg
ttgaagcacgtgaaagccttgacaaacctcattgatcagcagcagcagaaaatcattgcc
ctgcagagcggtttacaagctggtgatctgtcgggaagaaacatcgaggcagggcaagaa
atgttctgctcaggtttccagacttgtgcccgtgaggtacttcaatacctggctaagcat
gagaatactcgggacctgaaatcttcccaactcgtcactcatctccaccgtgtggtctct
gagctgctgcagggcggtgcttccaggaaaccattggactcagctcccaaagccatggac
ttcaaagagaagcccagcttcctagccaagggatcagaaggccctgggaaaaactgtgtg
ccagttatccagcggactttcgctccctccagtggggagcagagcggcagtgacacggac
acagacagtggctacggaggcgaattggagaagggggacttgcgcagtgagcagccatac
ttcaaaagcgaccatggacgcaggttcgccgtgggagaacgtgtcagcacaattaagcag
gaatcggaagagccccccaccaaaaagagccgtatgcagctctcggaagaggaaggccac
tttgcgggcagtgacctgatgggttccccatttctcgggccgcacccacatcagcctccc
ttttgccttcccttctatctcatcccaccatcggccactgcctacctgcctatgctggag
aaatgctggtaccccacctctgtgccagtgttatacccaggcctcaacacctcagcagca
gccctctccagtttcatgaacccagacaagatcccgactcccttgcttctgccccagaga
ctcccttctcccttagcacattcgtcccttgactcctcggccttgctccaggctctgaag
cagatccctcctttaaacttagaaaccaaagactaa
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