Mastomys coucha (southern multimammate mouse): 116099440
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Entry
116099440 CDS
T07224
Symbol
Mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
mcoc
Mastomys coucha (southern multimammate mouse)
Pathway
mcoc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcoc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
116099440 (Mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcoc03036
]
116099440 (Mbd4)
03400 DNA repair and recombination proteins [BR:
mcoc03400
]
116099440 (Mbd4)
Chromosome and associated proteins [BR:
mcoc03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
116099440 (Mbd4)
DNA repair and recombination proteins [BR:
mcoc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
116099440 (Mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
116099440
NCBI-ProteinID:
XP_031238895
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MESPNLGDNKVPSVTAGESLVPDPPWDRWQVFKPPSGLSGVALVWVFLTFNTSKEDVAVG
LGGVGEDGMDLVISSECSSPLQDPTASTPSSCTAATECHRPVPCGWQRVVKQRLHGKTAG
KFDVYFISPQGLKFRSKRSLAKYLLENGETFLKPEDFDFTVLSKAGISPGYKHQSLAALT
SQQPNETDISKQTLRTRSKWKTDVLSLPSGNSESPDSSRPSNSSSAHLPLEEQKGIQDAD
SGKRRQPKRKVTVLKGIASQKTKQRKRLSDSTQRNRKRGSVVQRTGPESEPTPLESHFNR
AACPADTCAGETVSLAGEESGLGPEKSPSPGSDLGFIQVTSGTTNKLYSTETASDAKREQ
TFLESEEIRSKGDKEGEAHLHLDVLQDGSEMSSCSQAKKDFTSETFREDSIPRTQVEKRK
TSLYFSSKYNKEALSPPRRKAFKKWTPPRSPFNLVQEILFHDPWKLLIATIFLNRTSGKM
AIPVLWEFLEKYPSAEVARTADWRDVSELLKPLGLYDLRAKTIIKFSDEYLTKQWRYPIE
LHGIGKYGNDSYRIFCVNEWKQVSPPLAISNISQHIQRICFWGKISPLVCLDL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggagagcccaaaccttggggacaacaaagtcccctccgtcaccgctggagagagccta
gtaccagacccgccttgggatcgctggcaagtttttaaacctccctcgggcctcagcgga
gtcgctcttgtgtgggtcttcctaaccttcaacacaagcaaggaagatgttgctgttgga
ctgggaggagtgggagaagatggaatggacctggtgataagcagtgagtgcagctcccct
ctccaggatcccactgcttctactccgtctagctgtactgcagcaacagaatgccacagg
cctgtcccctgtggatggcaaagagttgtgaagcaaaggttacatgggaaaactgcagga
aaatttgatgtatactttatcagcccacaaggattgaagttcagatcaaaacgttcactt
gctaagtatcttctcgaaaatggagagacttttcttaagcctgaagattttgattttact
gtactgtctaaagcgggcatcagtccaggttataaacaccagagtttggcggctctgact
tcccagcagccaaatgaaactgacatttcaaagcagaccctcaggacacgaagcaagtgg
aaaacagatgtgttgtctctgcccagcggtaactcagagtcgccagatagcagcagaccg
tctaactctagctctgctcacttgccactggaagaacagaagggcatccaggatgctgac
tctgggaagaggagacagcccaaaagaaaggtgactgttttaaaaggaattgcaagtcag
aaaaccaaacaaaggaagaggctctcagattctactcaaagaaacagaaaaagaggatct
gtggtccagagaacggggcctgagagcgagccaactccgctggaaagtcatttcaacaga
gccgcctgccccgcggatacctgtgcaggggagactgtcagcctggccggcgaagaaagc
ggcctgggaccagaaaaatcaccgagcccagggtcagatcttggtttcatacaagtaact
tctggtaccacaaacaagttatattcaactgaaacagccagtgatgcaaaacgtgagcag
acttttttagaatcagaggaaatcagatcgaagggagacaaagagggggaggcacatttg
catctcgacgttttacaagatggctctgaaatgtccagctgctcacaagccaagaaagac
tttacttctgagacatttcgagaagacagcatcccacgaacacaagtagaaaaaaggaaa
acaagcctgtatttttccagcaagtacaacaaagaagcccttagccccccaagacgcaaa
gccttcaagaaatggacccctcctcgatcaccttttaatcttgttcaagaaatacttttc
cacgatccatggaaactcctcatcgcaactatatttcttaatcggacctcaggcaagatg
gccatccctgtgctgtgggagtttctagagaaatacccttcagctgaagtggcccgcact
gctgactggagggacgtatcagagctccttaagcctcttggtctctatgatctccgcgca
aaaaccattatcaagttctcagatgaatatctgacaaagcagtggaggtatccgattgag
cttcatgggattggtaaatatggcaacgactcctaccggatcttttgtgtcaatgaatgg
aagcaggtaagcccaccactggccatttccaacataagccaacatatccagcgtatttgc
ttctggggcaaaataagcccactagtatgcctggatctatga
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